Derek Severi Lundberg
Derek Severi Lundberg
Postdoc in Weigel Lab, Max Planck Institute for Developmental Biology in Tübingen, Germany.
Verified email at tuebingen.mpg.de
Title
Cited by
Cited by
Year
Defining the core Arabidopsis thaliana root microbiome
DS Lundberg, SL Lebeis, SH Paredes, S Yourstone, J Gehring, S Malfatti, ...
Nature 488 (7409), 86-90, 2012
18602012
Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa
SL Lebeis, SH Paredes, DS Lundberg, N Breakfield, J Gehring, ...
Science 349 (6250), 860-864, 2015
6022015
Practical innovations for high-throughput amplicon sequencing
DS Lundberg, S Yourstone, P Mieczkowski, CD Jones, JL Dangl
Nature methods 10 (10), 999-1002, 2013
5832013
Host genotype and age shape the leaf and root microbiomes of a wild perennial plant
MR Wagner, DS Lundberg, G Tijana, SG Tringe, JL Dangl, T Mitchell-Olds
Nature communications 7 (1), 1-15, 2016
4272016
Genomic features of bacterial adaptation to plants
A Levy, IS Gonzalez, M Mittelviefhaus, S Clingenpeel, SH Paredes, ...
Nature genetics 50 (1), 138-150, 2018
2472018
Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative
MR Wagner, DS Lundberg, D Coleman‐Derr, SG Tringe, JL Dangl, ...
Ecology letters 17 (6), 717-726, 2014
1982014
Bacterial populations in juvenile maize rhizospheres originate from both seed and soil
D Johnston-Monje, DS Lundberg, G Lazarovits, VM Reis, MN Raizada
Plant and Soil 405 (1), 337-355, 2016
1522016
The Pseudomonas syringae Type III Effector HopAM1 Enhances Virulence on Water-Stressed Plants
AK Goel, D Lundberg, MA Torres, R Matthews, C Akimoto-Tomiyama, ...
Molecular Plant-Microbe Interactions 21 (3), 361-370, 2008
1362008
Arabidopsis thaliana and Pseudomonas pathogens exhibit stable associations over evolutionary timescales
TL Karasov, J Almario, C Friedemann, W Ding, M Giolai, D Heavens, ...
Cell host & microbe 24 (1), 168-179. e4, 2018
792018
Natural selection on the Arabidopsis thaliana genome in present and future climates
M Exposito-Alonso, HA Burbano, O Bossdorf, R Nielsen, D Weigel
Nature 573 (7772), 126-129, 2019
622019
ProDeGe: a computational protocol for fully automated decontamination of genomes
K Tennessen, E Andersen, S Clingenpeel, C Rinke, DS Lundberg, J Han, ...
The ISME journal 10 (1), 269-272, 2016
552016
Learning microbial interaction networks from metagenomic count data
S Biswas, M Mcdonald, DS Lundberg, JL Dangl, V Jojic
Journal of Computational Biology 23 (6), 526-535, 2016
372016
Methods for genotyping-by-sequencing
BA Rowan, DK Seymour, E Chae, DS Lundberg, D Weigel
Genotyping, 221-242, 2017
312017
Combining whole-genome shotgun sequencing and rRNA gene amplicon analyses to improve detection of microbe–microbe interaction networks in plant leaves
J Regalado, DS Lundberg, O Deusch, S Kersten, T Karasov, K Poersch, ...
The ISME Journal, 1-15, 2020
272020
MT-Toolbox: improved amplicon sequencing using molecule tags
SM Yourstone, DS Lundberg, JL Dangl, CD Jones
BMC bioinformatics 15 (1), 1-7, 2014
262014
Root-exuded coumarin shapes the root microbiome
DS Lundberg, PJPL Teixeira
Proceedings of the National Academy of Sciences 115 (22), 5629-5631, 2018
242018
Learning microbial interaction networks from metagenomic count data
S Biswas, M McDonald, DS Lundberg, JL Dangl, V Jojic
International Conference on Research in Computational Molecular Biology, 32-43, 2015
232015
The relationship between microbial population size and disease in the Arabidopsis thaliana phyllosphere
TL Karasov, M Neumann, A Duque-Jaramillo, S Kersten, I Bezrukov, ...
BioRxiv, 828814, 2020
152020
HASTY modulates miRNA biogenesis by linking pri-miRNA transcription and processing
DA Cambiagno, AJ Giudicatti, AL Arce, D Gagliardi, L Li, W Yuan, ...
Molecular Plant 14 (3), 426-439, 2021
102021
Corrigendum to Wagner et al.: Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative
MR Wagner, DS Lundberg, D Coleman‐Derr, SG Tringe, JL Dangl, ...
Ecology Letters 18 (2), 218-220, 2015
52015
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