| Efficient spatial segmentation of large imaging mass spectrometry datasets with spatially aware clustering T Alexandrov, JH Kobarg Bioinformatics 27 (13), i230-i238, 2011 | 160 | 2011 |
| Exploring three-dimensional matrix-assisted laser desorption/ionization imaging mass spectrometry data: three-dimensional spatial segmentation of mouse kidney D Trede, S Schiffler, M Becker, S Wirtz, K Steinhorst, J Strehlow, M Aichler, ... Analytical chemistry 84 (14), 6079–6087, 2012 | 136 | 2012 |
| Reliable entity subtyping in non-small cell lung cancer by matrix-assisted laser desorption/ionization imaging mass spectrometry on formalin-fixed paraffin-embedded tissue … M Kriegsmann, R Casadonte, J Kriegsmann, H Dienemann, ... Molecular & Cellular Proteomics 15 (10), 3081-3089, 2016 | 83 | 2016 |
| 2D and 3D MALDI-imaging: conceptual strategies for visualization and data mining H Thiele, S Heldmann, D Trede, J Strehlow, S Wirtz, W Dreher, J Berger, ... Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1844 (1), 117-137, 2014 | 80 | 2014 |
| Three-Dimensional Mass Spectrometry Imaging Identifies Lipid Markers of Medulloblastoma Metastasis MRL Paine, J Liu, D Huang, SR Ellis, D Trede, JH Kobarg, H Ron, ... Scientific Reports (Nature Publisher Group) 9 (1), 2019 | 73 | 2019 |
| Three-dimensional mass spectrometry imaging identifies lipid markers of medulloblastoma metastasis MRL Paine, J Liu, D Huang, SR Ellis, D Trede, JH Kobarg, RMA Heeren, ... Scientific reports 9 (1), 2205, 2019 | 73 | 2019 |
| Benchmark datasets for 3D MALDI-and DESI-imaging mass spectrometry J Oetjen, K Veselkov, J Watrous, JS McKenzie, M Becker, ... GigaScience 4 (1), 20, 2015 | 72 | 2015 |
| MRI-compatible pipeline for three-dimensional MALDI imaging mass spectrometry using PAXgene fixation J Oetjen, M Aichler, D Trede, J Strehlow, J Berger, S Heldmann, M Becker, ... Journal of proteomics 90, 52-60, 2013 | 69 | 2013 |
| On the importance of mathematical methods for analysis of MALDI-imaging mass spectrometry data D Trede, JH Kobarg, J Oetjen, H Thiele, P Maass, T Alexandrov Journal of Integrative Bioinformatics (JIB) 9 (1), 1-11, 2012 | 60 | 2012 |
| Proteomic analysis of the spatio-temporal based molecular kinetics of acute spinal cord injury identifies a time-and segment-specific window for effective tissue repair S Devaux, D Cizkova, J Quanico, J Franck, S Nataf, L Pays, ... Molecular & Cellular Proteomics 15 (8), 2641-2670, 2016 | 48 | 2016 |
| Super-resolution segmentation of imaging mass spectrometry data: Solving the issue of low lateral resolution T Alexandrov, S Meding, D Trede, JH Kobarg, B Balluff, A Walch, H Thiele, ... Journal of proteomics 75 (1), 237-245, 2011 | 43 | 2011 |
| Using the chemical noise background in MALDI mass spectrometry imaging for mass alignment and calibration T Boskamp, D Lachmund, R Casadonte, L Hauberg-Lotte, JH Kobarg, ... Analytical Chemistry 92 (1), 1301-1308, 2019 | 39 | 2019 |
| Unraveling local tissue changes within severely injured skeletal muscles in response to MSC-based intervention using MALDI Imaging mass spectrometry O Klein, K Strohschein, G Nebrich, M Fuchs, H Thiele, P Giavalisco, ... Scientific reports 8 (1), 1-11, 2018 | 19 | 2018 |
| Numerical experiments with MALDI Imaging data JH Kobarg, P Maass, J Oetjen, O Tropp, E Hirsch, C Sagiv, M Golbabaee, ... Advances in Computational Mathematics 40 (3), 667-682, 2014 | 11 | 2014 |
| Spatial segmentation and metabolite annotation involved in sperm maturation in the rat epididymis by MALDI imaging mass spectrometry M Lagarrigue, R Lavigne, B Guével, A Palmer, K Rondel, L Guillot, ... Journal of Mass Spectrometry 55 (12), e4633, 2020 | 9 | 2020 |
| O5. SCiLS Lab: software for analysis and interpretation of large MALDI-IMS datasets D Trede, S Schiffler, M Becker, S Wirtz, J Strehlow, JH Kobarg, ... OurCon 2012, 50, 2012 | 8 | 2012 |
| Mathematical methods for imaging mass spectrometry D Trede, JH Kobarg, K Steinhorst, T Alexandrov cancer research 4, 5, 2011 | 3 | 2011 |
| Mass spectrometric determination of tissue states D Trede, JH Kobarg, S Schiffler, K Steinhorst US Patent App. 16/888,137, 2020 | 1 | 2020 |
| Signal and image processing methods for imaging mass spectrometry data JH Kobarg Universität Bremen, 2014 | 1 | 2014 |
| Efficient Spatial Segmentation of Hyper-spectral 3D Volume Data JH Kobarg, T Alexandrov Algorithms from and for Nature and Life: Classification and Data Analysis …, 2013 | 1 | 2013 |
Theodore AlexandrovEMBL / BioInnovation InstituteVerified email at embl.de
