Deconstructing stepwise fate conversion of human fibroblasts to neurons by microRNAs K Cates, MJ McCoy, JS Kwon, Y Liu, DG Abernathy, B Zhang, S Liu, ... Cell stem cell 28 (1), 127-140. e9, 2021 | 49 | 2021 |
Regulatory networks specifying cortical interneurons from human embryonic stem cells reveal roles for CHD2 in interneuron development K Meganathan, EMA Lewis, P Gontarz, S Liu, EG Stanley, AG Elefanty, ... Proceedings of the National Academy of Sciences 114 (52), E11180-E11189, 2017 | 46 | 2017 |
Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science DR Unni, SAT Moxon, M Bada, M Brush, R Bruskiewich, JH Caufield, ... Clinical and Translational Science, 2022 | 44 | 2022 |
Comparison of differential accessibility analysis strategies for ATAC-seq data P Gontarz, S Fu, X Xing, S Liu, B Miao, V Bazylianska, A Sharma, ... Scientific reports 10 (1), 1-13, 2020 | 34 | 2020 |
AIAP: A quality control and integrative analysis package to improve ATAC-seq data analysis S Liu, D Li, C Lyu, PM Gontarz, B Miao, PAF Madden, T Wang, B Zhang Genomics, proteomics & bioinformatics 19 (4), 641-651, 2021 | 23* | 2021 |
Progress toward a universal biomedical data translator K Fecho, AE Thessen, SE Baranzini, C Bizon, JJ Hadlock, S Huang, ... Clinical and Translational Science 15 (8), 1838-1847, 2022 | 19 | 2022 |
The role of Twist1 in mutant huntingtin–induced transcriptional alterations and neurotoxicity Y Pan, Y Zhu, W Yang, E Tycksen, S Liu, J Palucki, L Zhu, Y Sasaki, ... Journal of Biological Chemistry 293 (30), 11850-11866, 2018 | 17 | 2018 |
Chamber-specific transcriptional responses in atrial fibrillation CE Lipovsky, J Jimenez, Q Guo, G Li, T Yin, SC Hicks, S Bhatnagar, ... JCI insight 5 (18), 2020 | 12 | 2020 |
CMash: fast, multi-resolution estimation of k-mer-based Jaccard and containment indices S Liu, D Koslicki Bioinformatics 38 (Supplement_1), i28-i35, 2022 | 11 | 2022 |
Conditional Activation of NF‐κB Inducing Kinase (NIK) in the Osteolineage Enhances Both Basal and Loading‐Induced Bone Formation JL Davis, L Cox, C Shao, C Lyu, S Liu, R Aurora, DJ Veis Journal of Bone and Mineral Research 34 (11), 2087-2100, 2019 | 10 | 2019 |
ARAX: a graph-based modular reasoning tool for translational biomedicine AK Glen, C Ma, L Mendoza, F Womack, EC Wood, M Sinha, L Acevedo, ... bioRxiv, 2022 | 2 | 2022 |
Multistage Regulator Based on Tandem Promoters and CRISPR/Cas H Jia, T Liang, Z Wang, Z He, Y Liu, L Yang, Y Zeng, S Liu, L Tang, ... ACS synthetic biology 3 (12), 1007-1010, 2014 | 2 | 2014 |