Tak-Wah Lam
Title
Cited by
Cited by
Year
SOAP2: an improved ultrafast tool for short read alignment
R Li, C Yu, Y Li, TW Lam, SM Yiu, K Kristiansen, J Wang
Bioinformatics 25 (15), 1966-1967, 2009
32932009
SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler
R Luo, B Liu, Y Xie, Z Li, W Huang, J Yuan, G He, Y Chen, Q Pan, Y Liu, ...
Gigascience 1 (1), 2047-217X-1-18, 2012
30792012
MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
D Li, CM Liu, R Luo, K Sadakane, TW Lam
Bioinformatics 31 (10), 1674-1676, 2015
11702015
The sequence and de novo assembly of the giant panda genome
R Li, W Fan, G Tian, H Zhu, L He, J Cai, Q Huang, Q Cai, B Li, Y Bai, ...
Nature 463 (7279), 311-317, 2010
11482010
SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads
Y Xie, G Wu, J Tang, R Luo, J Patterson, S Liu, W Huang, G He, S Gu, S Li, ...
Bioinformatics 30 (12), 1660-1666, 2014
6752014
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ...
GigaScience 2 (1), 2047-217X-2-10, 2013
5992013
MEGAHIT v1. 0: A fast and scalable metagenome assembler driven by advanced methodologies and community practices
D Li, R Luo, CM Liu, CM Leung, HF Ting, K Sadakane, H Yamashita, ...
Methods 102, 3-11, 2016
3232016
SOAP3: ultra-fast GPU-based parallel alignment tool for short reads
CM Liu, T Wong, E Wu, R Luo, SM Yiu, Y Li, B Wang, C Yu, X Chu, K Zhao, ...
Bioinformatics 28 (6), 878-879, 2012
2572012
Compressed indexing and local alignment of DNA
TW Lam, WK Sung, SL Tam, CK Wong, SM Yiu
Bioinformatics 24 (6), 791-797, 2008
1562008
COPE: an accurate k-mer-based pair-end reads connection tool to facilitate genome assembly
B Liu, J Yuan, SM Yiu, Z Li, Y Xie, Y Chen, Y Shi, H Zhang, Y Li, TW Lam, ...
Bioinformatics 28 (22), 2870-2874, 2012
1402012
SOAPsplice: genome-wide ab initio detection of splice junctions from RNA-Seq data
S Huang, J Zhang, R Li, W Zhang, Z He, TW Lam, Z Peng, SM Yiu
Frontiers in genetics 2, 46, 2011
1282011
SOAP3-dp: fast, accurate and sensitive GPU-based short read aligner
R Luo, T Wong, J Zhu, CM Liu, X Zhu, E Wu, LK Lee, H Lin, W Zhu, ...
PloS one 8 (5), e65632, 2013
1212013
Energy efficient online deadline scheduling
HL Chan, WT Chan, TW Lam, LK Lee, KS Mak, PWH Wong
SODA 7, 795-804, 2007
1182007
Scheduling for speed bounded processors
N Bansal, HL Chan, TW Lam, LK Lee
International Colloquium on Automata, Languages, and Programming, 409-420, 2008
1092008
High throughput short read alignment via bi-directional BWT
TW Lam, R Li, A Tam, S Wong, E Wu, SM Yiu
2009 IEEE International Conference on Bioinformatics and Biomedicine, 31-36, 2009
1042009
Compressed indexes for dynamic text collections
HL Chan, WK Hon, TW Lam, K Sadakane
ACM Transactions on Algorithms (TALG) 3 (2), 21-es, 2007
1032007
Filtering of ineffective siRNAs and improved siRNA design tool
SM Yiu, PWH Wong, TW Lam, YC Mui, HF Kung, M Lin, YT Cheung
Bioinformatics 21 (2), 144-151, 2005
962005
Speed scaling functions for flow time scheduling based on active job count
TW Lam, LK Lee, IKK To, PWH Wong
European Symposium on Algorithms, 647-659, 2008
952008
Finding connected components in O (log n log log n) time on the EREW PRAM
KW Chong, TW Lam
Journal of Algorithms 18 (3), 378-402, 1995
811995
Optimal edge ranking of trees in linear time
TW Lam, FL Yue
Algorithmica 30 (1), 12-33, 2001
792001
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Articles 1–20