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Shixiang Sun
Shixiang Sun
Albert Einstein Colloege of Medicine
Verified email at einsteinmed.org
Title
Cited by
Cited by
Year
PGAP: pan-genomes analysis pipeline
Y Zhao, J Wu, J Yang, S Sun, J Xiao, J Yu
Bioinformatics 28 (3), 416-418, 2012
4952012
Cassava genome from a wild ancestor to cultivated varieties
W Wang, B Feng, J Xiao, Z Xia, X Zhou, P Li, W Zhang, Y Wang, BL Møller, ...
Nature communications 5 (1), 5110, 2014
2772014
Database resources of the BIG data center in 2018
Nucleic Acids Research 46 (D1), D14-D20, 2018
1052018
The BIG Data Center: from deposition to integration to translation
BIG Data Center Members
Nucleic acids research 45 (D1), D18-D24, 2017
952017
Single-cell analysis reveals different age-related somatic mutation profiles between stem and differentiated cells in human liver
K Brazhnik, S Sun, O Alani, M Kinkhabwala, AW Wolkoff, AY Maslov, ...
Science Advances 6 (5), eaax2659, 2020
932020
Single-cell analysis of somatic mutations in human bronchial epithelial cells in relation to aging and smoking
Z Huang, S Sun, M Lee, AY Maslov, M Shi, S Waldman, A Marsh, ...
Nature genetics 54 (4), 492-498, 2022
582022
MethBank 3.0: a database of DNA methylomes across a variety of species
R Li, F Liang, M Li, D Zou, S Sun, Y Zhao, W Zhao, Y Bao, J Xiao, Z Zhang
Nucleic acids research 46 (D1), D288-D295, 2018
552018
MethBank: a database integrating next-generation sequencing single-base-resolution DNA methylation programming data
D Zou, S Sun, R Li, J Liu, J Zhang, Z Zhang
Nucleic acids research 43 (D1), D54-D58, 2015
412015
SomaMutDB: a database of somatic mutations in normal human tissues
S Sun, Y Wang, AY Maslov, X Dong, J Vijg
Nucleic acids research 50 (D1), D1100-D1108, 2022
232022
Inducible aging in Hydra oligactis implicates sexual reproduction, loss of stem cells, and genome maintenance as major pathways
S Sun, RR White, KE Fischer, Z Zhang, SN Austad, J Vijg
GeroScience 42, 1119-1132, 2020
182020
Pangenome evidence for higher codon usage bias and stronger translational selection in core genes of Escherichia coli
S Sun, J Xiao, H Zhang, Z Zhang
Frontiers in microbiology 7, 197633, 2016
162016
Single-molecule, quantitative detection of low-abundance somatic mutations by high-throughput sequencing
AY Maslov, S Makhortov, S Sun, J Heid, X Dong, M Lee, J Vijg
Science Advances 8 (14), eabm3259, 2022
152022
Age‐related telomere attrition causes aberrant gene expression in sub‐telomeric regions
X Dong, S Sun, L Zhang, S Kim, Z Tu, C Montagna, AY Maslov, Y Suh, ...
Aging cell 20 (6), e13357, 2021
152021
Single-cell analysis of somatic mutation burden in mammary epithelial cells of pathogenic BRCA1/2 mutation carriers
S Sun, K Brazhnik, M Lee, AY Maslov, Y Zhang, Z Huang, S Klugman, ...
The Journal of Clinical Investigation 132 (5), 2022
132022
Randomness in sequence evolution increases over time
G Wang, S Sun, Z Zhang
PLoS One 11 (5), e0155935, 2016
132016
Synonymous codon usage analysis of hand, foot and mouth disease viruses: a comparative study on coxsackievirus A6, A10, A16, and enterovirus 71 from 2008 to 2015
W Su, X Li, M Chen, W Dai, S Sun, S Wang, X Sheng, S Sun, C Gao, ...
Infection, Genetics and Evolution 53, 212-217, 2017
112017
Expression of retrotransposons contributes to aging in Drosophila
BK Schneider, S Sun, M Lee, W Li, N Skvir, N Neretti, J Vijg, J Secombe
Genetics 224 (2), iyad073, 2023
62023
Chromosome instability and aneuploidy in the mammalian brain
O Albert, S Sun, A Huttner, Z Zhang, Y Suh, J Campisi, J Vijg, C Montagna
Chromosome Research 31 (4), 32, 2023
12023
Correction: Randomness in Sequence Evolution Increases over Time
G Wang, S Sun, Z Zhang
Plos one 11 (6), e0158191, 2016
12016
Evidence for negative selection in human primary fibroblasts to tolerate high somatic mutation loads upon treatment with multiple low doses of N-ethyl-N-nitrosourea
J Heid, R Cutler, S Sun, M Lee, AY Maslov, X Dong, S Sidoli, J Vijg
bioRxiv, 2024.04. 07.588286, 2024
2024
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