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André R. Soares
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Metagenomic binning reveals versatile nutrient cycling and distinct adaptive features in alphaproteobacterial symbionts of marine sponges
E Karimi, BM Slaby, AR Soares, J Blom, U Hentschel, R Costa
FEMS microbiology ecology 94 (6), fiy074, 2018
692018
In-field metagenome and 16S rRNA gene amplicon nanopore sequencing robustly characterize glacier microbiota
A Edwards, AR Debbonaire, SM Nicholls, SME Rassner, B Sattler, ...
BioRxiv, 073965, 2016
42*2016
Deep sequencing: intra-terrestrial metagenomics illustrates the potential of off-grid Nanopore DNA sequencing
A Edwards, A Soares, SME Rassner, P Green, J Felix, AC Mitchell
BioRxiv, 133413, 2017
182017
A global perspective on bacterial diversity in the terrestrial deep subsurface
A Soares, A Edwards, D An, A Bagnoud, J Bradley, E Barnhart, ...
Microbiology 169 (1), 001172, 2023
172023
Combined Omics Approach Reveals Key Differences between Aerobic and Microaerobic Xylene-Degrading Enrichment Bacterial Communities: Rhodoferax─A …
A Táncsics, S Banerjee, A Soares, A Bedics, B Kriszt
Environmental Science & Technology 57 (7), 2846-2855, 2023
72023
Isolation of Pseudomonas aromaticivorans sp. nov from a hydrocarbon-contaminated groundwater capable of degrading benzene-, toluene-, m- and p-xylene …
S Banerjee, A Bedics, E Tóth, B Kriszt, AR Soares, K Bóka, A Táncsics
Frontiers in Microbiology 13, 929128, 2022
72022
Recovery of gene haplotypes from a metagenome
S Nicholls, W Aubrey, A Edwards, K de Grave, S Huws, S Leander, ...
72018
Heads in the clouds: marine viruses disperse bidirectionally along the natural water cycle
J Rahlff, SP Esser, J Plewka, ME Heinrichs, A Soares, C Scarchilli, ...
bioRxiv, 2022.06. 21.497027, 2022
62022
Before you go: a packing list for portable DNA sequencing of microbiomes and metagenomes
A Edwards, A Soares, A Debbonaire, SME Rassner
Microbiology (United Kingdom) 168 (7), 001220, 2022
52022
Bacterial populations in different parts of domestic drinking water systems are distinct and adapted to the given ambient temperatures
B Meyer, M Pannekens, AR Soares, L Timmermann, AJ Probst, ...
Frontiers in Water 5, 1119951, 2023
42023
Temporal disturbance of a model stream ecosystem by high microbial diversity from treated wastewater
TL Stach, G Sieber, M Shah, SA Simon, A Soares, TLV Bornemann, ...
MicrobiologyOpen 12 (2), e1347, 2023
32023
Label-free Raman microspectroscopy for identifying prokaryotic virocells
I Monsees, V Turzynski, SP Esser, A Soares, LI Timmermann, ...
Msystems 7 (1), e01505-21, 2022
32022
Marine viruses disperse bidirectionally along the natural water cycle
J Rahlff, SP Esser, J Plewka, ME Heinrichs, A Soares, C Scarchilli, ...
Nature Communications 14 (1), 6354, 2023
22023
Computational haplotype recovery and long-read validation identifies novel isoforms of industrially relevant enzymes from natural microbial communities
SM Nicholls, W Aubrey, A Edwards, K de Grave, S Huws, L Schietgat, ...
bioRxiv, 223404, 2017
22017
Diversity and specificity of the marine sponge microbiome as inspected by next generation sequencing
AR Soares
PQDT-Global, 2015
22015
Dancing the Nanopore limbo–Nanopore metagenomics from small DNA quantities for bacterial genome reconstruction
SA Simon, K Schmidt, L Griesdorn, AR Soares, TLV Bornemann, ...
BMC genomics 24 (1), 727, 2023
12023
Virus-host dynamics in archaeal groundwater biofilms and the associated bacterial community composition
V Turzynski, L Griesdorn, C Moraru, AR Soares, SA Simon, TL Stach, ...
Viruses 15 (4), 910, 2023
12023
Metagenome-assembled genomes from High Arctic glaciers highlight the vulnerability of glacier-associated microbiota and their activities to habitat loss
MC Hay, AC Mitchell, AR Soares, AR Debbonaire, DC Mogrovejo, N Els, ...
Microbial Genomics 9 (11), 001131, 2023
2023
Biodegradation of Benzene Under Microaerobic Conditions: a Groundwater Microcosm Experiment Combined with a Multiomics Approach and DNA Stable Isotope Probing
A Tancsics, A Bedics, A Soares, B Kriszt
ARPHA Conference Abstracts 6, e107378, 2023
2023
Spatio-functional organization in virocells of small uncultivated archaea from the deep biosphere
I Banas, SP Esser, V Turzynski, A Soares, P Novikova, P May, C Moraru, ...
The ISME Journal 17 (10), 1789-1792, 2023
2023
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