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Hera Vlamakis
Hera Vlamakis
Director of Research Administration in Microbiology, Harvard Medical School
Verified email at hms.harvard.edu
Title
Cited by
Cited by
Year
Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases
J Lloyd-Price, C Arze, AN Ananthakrishnan, M Schirmer, J Avila-Pacheco, ...
Nature 569 (7758), 655-662, 2019
19142019
Gut microbiome structure and metabolic activity in inflammatory bowel disease
EA Franzosa, A Sirota-Madi, J Avila-Pacheco, N Fornelos, HJ Haiser, ...
Nature microbiology 4 (2), 293-305, 2019
12762019
Variation in microbiome LPS immunogenicity contributes to autoimmunity in humans
T Vatanen, AD Kostic, E d’Hennezel, H Siljander, EA Franzosa, ...
Cell 165 (4), 842-853, 2016
12592016
Biofilms
D López, H Vlamakis, R Kolter
Cold Spring Harbor perspectives in biology 2 (7), a000398, 2010
11382010
Sticking together: building a biofilm the Bacillus subtilis way
H Vlamakis, Y Chai, P Beauregard, R Losick, R Kolter
Nature Reviews Microbiology 11 (3), 157-168, 2013
10782013
Linking the human gut microbiome to inflammatory cytokine production capacity
M Schirmer, SP Smeekens, H Vlamakis, M Jaeger, M Oosting, ...
Cell 167 (4), 1125-1136. e8, 2016
10412016
Mother-to-infant microbial transmission from different body sites shapes the developing infant gut microbiome
P Ferretti, E Pasolli, A Tett, F Asnicar, V Gorfer, S Fedi, F Armanini, ...
Cell host & microbe 24 (1), 133-145. e5, 2018
9912018
Natural history of the infant gut microbiome and impact of antibiotic treatment on bacterial strain diversity and stability
M Yassour, T Vatanen, H Siljander, AM Hämäläinen, T Härkönen, ...
Science translational medicine 8 (343), 343ra81-343ra81, 2016
9042016
A defined commensal consortium elicits CD8 T cells and anti-cancer immunity
T Tanoue, S Morita, DR Plichta, AN Skelly, W Suda, Y Sugiura, ...
Nature 565 (7741), 600-605, 2019
8802019
The human gut microbiome in early-onset type 1 diabetes from the TEDDY study
T Vatanen, EA Franzosa, R Schwager, S Tripathi, TD Arthur, K Vehik, ...
Nature 562 (7728), 589-594, 2018
7042018
Evidence for Extensive Resistance Gene Transfer amongBacteroides spp. and among Bacteroides and Other Genera in the Human Colon
NB Shoemaker, H Vlamakis, K Hayes, AA Salyers
Applied and environmental microbiology 67 (2), 561-568, 2001
6962001
Indoleacrylic acid produced by commensal peptostreptococcus species suppresses inflammation
M Wlodarska, C Luo, R Kolde, E d’Hennezel, JW Annand, CE Heim, ...
Cell host & microbe 22 (1), 25-37. e6, 2017
6242017
Control of cell fate by the formation of an architecturally complex bacterial community
H Vlamakis, C Aguilar, R Losick, R Kolter
Genes & development 22 (7), 945-953, 2008
6222008
Bacillus subtilis biofilm induction by plant polysaccharides
PB Beauregard, Y Chai, H Vlamakis, R Losick, R Kolter
Proceedings of the National Academy of Sciences 110 (17), E1621-E1630, 2013
6082013
A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients
AB Hall, M Yassour, J Sauk, A Garner, X Jiang, T Arthur, GK Lagoudas, ...
Genome medicine 9, 1-12, 2017
5692017
All-printable band-edge modulated ZnO nanowire photodetectors with ultra-high detectivity
X Liu, L Gu, Q Zhang, J Wu, Y Long, Z Fan
Nature communications 5 (1), 4007, 2014
5662014
Ruminococcus gnavus, a member of the human gut microbiome associated with Crohn’s disease, produces an inflammatory polysaccharide
MT Henke, DJ Kenny, CD Cassilly, H Vlamakis, RJ Xavier, J Clardy
Proceedings of the National Academy of Sciences 116 (26), 12672-12677, 2019
5522019
Microbial genes and pathways in inflammatory bowel disease
M Schirmer, A Garner, H Vlamakis, RJ Xavier
Nature Reviews Microbiology 17 (8), 497-511, 2019
5442019
Structure-based protein function prediction using graph convolutional networks
V Gligorijević, PD Renfrew, T Kosciolek, JK Leman, D Berenberg, ...
Nature communications 12 (1), 3168, 2021
5122021
Dynamics of metatranscription in the inflammatory bowel disease gut microbiome
M Schirmer, EA Franzosa, J Lloyd-Price, LJ McIver, R Schwager, ...
Nature microbiology 3 (3), 337-346, 2018
4612018
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