| Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe DU Kim, J Hayles, D Kim, V Wood, HO Park, M Won, HS Yoo, T Duhig, ... Nature biotechnology 28 (6), 617-623, 2010 | 794 | 2010 |
| RAPTOR: optimal protein threading by linear programming J Xu, M Li, D Kim, Y Xu Journal of bioinformatics and computational biology 1 (01), 95-117, 2003 | 358 | 2003 |
| A compendium of promoter-centered long-range chromatin interactions in the human genome I Jung, A Schmitt, Y Diao, AJ Lee, T Liu, D Yang, C Tan, J Eom, M Chan, ... Nature genetics 51 (10), 1442-1449, 2019 | 312 | 2019 |
| Two genetic variants of CD38 in subjects with autism spectrum disorder and controls T Munesue, S Yokoyama, K Nakamura, A Anitha, K Yamada, K Hayashi, ... Neuroscience research 67 (2), 181-191, 2010 | 226 | 2010 |
| A feature-based approach to modeling protein–protein interaction hot spots K Cho, D Kim, D Lee Nucleic acids research 37 (8), 2672-2687, 2009 | 185 | 2009 |
| Design of a binding scaffold based on variable lymphocyte receptors of jawless vertebrates by module engineering SC Lee, K Park, J Han, J Lee, HJ Kim, S Hong, W Heu, YJ Kim, JS Ha, ... Proceedings of the National Academy of Sciences 109 (9), 3299-3304, 2012 | 183 | 2012 |
| PROSPECT II: protein structure prediction program for genomescale applications D Kim, D Xu, J Guo, K Ellrott, Y Xu Protein engineering 16 (9), 641-650, 2003 | 140 | 2003 |
| Using reverse docking for target identification and its applications for drug discovery A Lee, K Lee, D Kim Expert opinion on drug discovery 11 (7), 707-715, 2016 | 128 | 2016 |
| 3DIV: A 3D-genome Interaction Viewer and database D Yang, I Jang, J Choi, MS Kim, AJ Lee, H Kim, J Eom, D Kim, I Jung, ... Nucleic acids research 46 (D1), D52-D57, 2018 | 122 | 2018 |
| Human histone H3K79 methyltransferase DOT1L methyltransferase binds actively transcribing RNA polymerase II to regulate gene expression SK Kim, I Jung, H Lee, K Kang, M Kim, K Jeong, CS Kwon, YM Han, ... Journal of Biological Chemistry 287 (47), 39698-39709, 2012 | 110 | 2012 |
| Deep convolutional neural networks for pan-specific peptide-MHC class I binding prediction Y Han, D Kim BMC bioinformatics 18 (1), 1-9, 2017 | 109 | 2017 |
| Expression profiles of miRNAs in human embryonic stem cells during hepatocyte differentiation N Kim, H Kim, I Jung, Y Kim, D Kim, YM Han Hepatology Research 41 (2), 170-183, 2011 | 108 | 2011 |
| A late-lineage murine neutrophil precursor population exhibits dynamic changes during demand-adapted granulopoiesis MH Kim, D Yang, M Kim, SY Kim, D Kim, SJ Kang Scientific reports 7 (1), 39804, 2017 | 90 | 2017 |
| Improving the performance of DomainParser for structural domain partition using neural network J Guo, D Xu, D Kim, Y Xu Nucleic acids research 31 (3), 944-952, 2003 | 89 | 2003 |
| Development of a graph convolutional neural network model for efficient prediction of protein-ligand binding affinities J Son, D Kim Plos one 16 (4), e0249404, 2021 | 86 | 2021 |
| AtRTPrimer: database for Arabidopsis genome-wide homogeneous and specific RT-PCR primer-pairs S Han, D Kim BMC bioinformatics 7 (1), 1-9, 2006 | 86 | 2006 |
| A High-Affinity Protein Binder that Blocks the IL-6/STAT3 Signaling Pathway Effectively Suppresses Non–Small Cell Lung Cancer J Lee, HJ Kim, CS Yang, HH Kyeong, JM Choi, DE Hwang, JM Yuk, ... Molecular Therapy 22 (7), 1254-1265, 2014 | 85 | 2014 |
| Protein threading by linear programming J Xu, M Li, G Lin, D Kim, Y Xu Biocomputing 2003, 264-275, 2002 | 77* | 2002 |
| Saccharomyces cerevisiae Genome-Wide Mutant Screen for Sensitivity to 2,4-Diacetylphloroglucinol, an Antibiotic Produced by Pseudomonas fluorescens YS Kwak, S Han, LS Thomashow, JT Rice, TC Paulitz, D Kim, DM Weller Applied and environmental microbiology 77 (5), 1770-1776, 2011 | 72 | 2011 |
| Autonomous molecule generation using reinforcement learning and docking to develop potential novel inhibitors W Jeon, D Kim Scientific reports 10 (1), 22104, 2020 | 71 | 2020 |
