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Matthew C Hale
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Next-generation pyrosequencing of gonad transcriptomes in the polyploid lake sturgeon (Acipenser fulvescens): the relative merits of normalization and rarefaction …
MC Hale, CR McCormick, JR Jackson, JA DeWoody
BMC genomics 10, 1-11, 2009
1642009
Genetic Architecture of Migration-Related Traits in Rainbow and Steelhead Trout, Oncorhynchus mykiss
BC Hecht, FP Thrower, MC Hale, MR Miller, KM Nichols
G3: Genes| Genomes| Genetics 2 (9), 1113-1127, 2012
1402012
Evaluating Adaptive Divergence Between Migratory and Nonmigratory Ecotypes of a Salmonid Fish, Oncorhynchus mykiss
MC Hale, FP Thrower, EA Berntson, MR Miller, KM Nichols
G3: Genes, Genomes, Genetics 3 (8), 1273-1285, 2013
1092013
Discovery and evaluation of candidate sex-determining genes and xenobiotics in the gonads of lake sturgeon (Acipenser fulvescens)
MC Hale, JR Jackson, JA DeWoody
Genetica 138, 745-756, 2010
932010
A predicted microsatellite map of the passerine genome based on chicken–passerine sequence similarity
DA Dawson, T Burke, B Hansson, J Pandhal, MC Hale, GN Hinten, J Slate
Molecular Ecology 15 (5), 1299-1320, 2006
932006
Evidence of inbreeding depression but not inbreeding avoidance in a natural house sparrow population
AM Billing, AM Lee, S Skjelseth, ÅA Borg, MC Hale, JON Slate, H Pärn, ...
Molecular Ecology 21 (6), 1487-1499, 2012
722012
Simple sequence repeats in zebra finch (Taeniopygia guttata) expressed sequence tags: a new resource for evolutionary genetic studies of passerines
J Slate, MC Hale, TR Birkhead
Bmc Genomics 8, 1-12, 2007
702007
Differential gene expression in male and female rainbow trout embryos prior to the onset of gross morphological differentiation of the gonads
MC Hale, P Xu, J Scardina, PA Wheeler, GH Thorgaard, KM Nichols
BMC genomics 12, 1-19, 2011
592011
Ontogenetic changes in embryonic and brain gene expression in progeny produced from migratory and resident Oncorhynchus mykiss
GJ McKinney, MC Hale, G Goetz, M Gribskov, FP Thrower, KM Nichols
Molecular Ecology 24 (8), 1792-1809, 2015
392015
A priori and a posteriori approaches for finding genes of evolutionary interest in non-model species: osmoregulatory genes in the kidney transcriptome of the desert rodent …
NJ Marra, SH Eo, MC Hale, PM Waser, JA DeWoody
Comparative Biochemistry and Physiology Part D: Genomics and Proteomics 7 (4 …, 2012
362012
RNA-seq reveals differential gene expression in the brains of juvenile resident and migratory smolt rainbow trout (Oncorhynchus mykiss)
MC Hale, GJ McKinney, FP Thrower, KM Nichols
Comparative Biochemistry and Physiology Part D: Genomics and Proteomics 20 …, 2016
332016
Population genomics of C. melanopterus using target gene capture data: demographic inferences and conservation perspectives
P Maisano Delser, S Corrigan, M Hale, C Li, M Veuille, S Planes, ...
Scientific Reports 6 (1), 33753, 2016
312016
Comparative transcriptomics and gene expression in larval tiger salamander (Ambystoma tigrinum) gill and lung tissues as revealed by pyrosequencing
SH Eo, JM Doyle, MC Hale, NJ Marra, JD Ruhl, JA DeWoody
Gene 492 (2), 329-338, 2012
302012
Long-term conservation of ohnologs through partial tetrasomy following whole-genome duplication in Salmonidae
MA Campbell, MC Hale, GJ McKinney, KM Nichols, DE Pearse
G3: Genes, Genomes, Genetics 9 (6), 2017-2028, 2019
242019
A large-scale chromosomal inversion is not associated with life history development in rainbow trout from Southeast Alaska
SY Weinstein, FP Thrower, KM Nichols, MC Hale
PloS one 14 (9), e0223018, 2019
222019
SNP‐SCALE: SNP scoring by colour and length exclusion
GN Hinten, MC Hale, J Gratten, JA Mossman, BV Lowder, MK Mann, ...
Molecular Ecology Notes 7 (3), 377-388, 2007
212007
Using RNA-seq to determine patterns of sex-bias in gene expression in the brain of the sex-role reversed Gulf Pipefish (Syngnathus scovelli)
AP Beal, FD Martin, MC Hale
Marine genomics 37, 120-127, 2018
172018
Small subordinate male advantage in the zebrafish
PJ Watt, A Skinner, M Hale, S Nakagawa, T Burke
Ethology 117 (11), 1003-1008, 2011
172011
Comparative Genomic Analyses and a Novel Linkage Map for Cisco (Coregonus artedi) Provide Insights into Chromosomal Evolution and Rediploidization Across …
DM Blumstein, MA Campbell, MC Hale, BJG Sutherland, GJ McKinney, ...
G3: Genes, Genomes, Genetics 10 (8), 2863-2878, 2020
162020
Evidence of sex-bias in gene expression in the brain transcriptome of two populations of rainbow trout (Oncorhynchus mykiss) with divergent life histories
MC Hale, GJ McKinney, FP Thrower, KM Nichols
PLoS One 13 (2), e0193009, 2018
162018
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Articles 1–20