| Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events VK Wong, S Baker, DJ Pickard, J Parkhill, AJ Page, NA Feasey, ... Nature genetics 47 (6), 632-639, 2015 | 469 | 2015 |
| Intercontinental dissemination of azithromycin-resistant shigellosis through sexual transmission: a cross-sectional study KS Baker, TJ Dallman, PM Ashton, M Day, G Hughes, PD Crook, ... The Lancet infectious diseases 15 (8), 913-921, 2015 | 253 | 2015 |
| The Rising Dominance of Shigella sonnei: An Intercontinental Shift in the Etiology of Bacillary Dysentery CN Thompson, PT Duy, S Baker PLoS neglected tropical diseases 9 (6), e0003708, 2015 | 186 | 2015 |
| Emergence of a globally dominant IncHI1 plasmid type associated with multiple drug resistant typhoid KE Holt, MD Phan, S Baker, PT Duy, TVT Nga, S Nair, AK Turner, C Walsh, ... PLoS neglected tropical diseases 5 (7), e1245, 2011 | 159 | 2011 |
| Whole-genome sequences of Chlamydia trachomatis directly from clinical samples without culture HMB Seth-Smith, SR Harris, RJ Skilton, FM Radebe, D Golparian, ... Genome research 23 (5), 855-866, 2013 | 151 | 2013 |
| Tracking the establishment of local endemic populations of an emergent enteric pathogen KE Holt, TV Thieu Nga, DP Thanh, H Vinh, DW Kim, MP Vu Tra, ... Proceedings of the National Academy of Sciences 110 (43), 17522-17527, 2013 | 145 | 2013 |
| Combined high-resolution genotyping and geospatial analysis reveals modes of endemic urban typhoid fever transmission S Baker, KE Holt, ACA Clements, A Karkey, A Arjyal, MF Boni, S Dongol, ... Open biology 1 (2), 110008, 2011 | 143 | 2011 |
| A changing picture of shigellosis in southern Vietnam: shifting species dominance, antimicrobial susceptibility and clinical presentation H Vinh, NTK Nhu, TVT Nga, PT Duy, JI Campbell, NVM Hoang, MF Boni, ... BMC infectious diseases 9, 1-12, 2009 | 141 | 2009 |
| Fitness benefits in fluoroquinolone-resistant Salmonella Typhi in the absence of antimicrobial pressure S Baker, PT Duy, TVT Nga, TTN Dung, VV Phat, TT Chau, AK Turner, ... Elife 2, e01229, 2013 | 134 | 2013 |
| The genomic signatures of Shigella evolution, adaptation and geographical spread HC The, DP Thanh, KE Holt, NR Thomson, S Baker Nature Reviews Microbiology 14 (4), 235-250, 2016 | 133 | 2016 |
| Species-wide whole genome sequencing reveals historical global spread and recent local persistence in Shigella flexneri TR Connor, CR Barker, KS Baker, FX Weill, KA Talukder, AM Smith, ... elife 4, e07335, 2015 | 126 | 2015 |
| A novel ciprofloxacin-resistant subclade of H58 Salmonella Typhi is associated with fluoroquinolone treatment failure D Pham Thanh, A Karkey, S Dongol, N Ho Thi, CN Thompson, MA Rabaa, ... Elife 5, e14003, 2016 | 125 | 2016 |
| The phylogeography and incidence of multi-drug resistant typhoid fever in sub-Saharan Africa SE Park, DT Pham, C Boinett, VK Wong, GD Pak, U Panzner, ... Nature communications 9 (1), 5094, 2018 | 108 | 2018 |
| The Ecological Dynamics of Fecal Contamination and Salmonella Typhi and Salmonella Paratyphi A in Municipal Kathmandu Drinking Water A Karkey, T Jombart, AW Walker, CN Thompson, A Torres, S Dongol, ... PLoS neglected tropical diseases 10 (1), e0004346, 2016 | 106 | 2016 |
| The burden and characteristics of enteric fever at a healthcare facility in a densely populated area of Kathmandu A Karkey, A Arjyal, KL Anders, MF Boni, S Dongol, S Koirala, PVT My, ... PloS one 5 (11), e13988, 2010 | 103 | 2010 |
| A high‐resolution genomic analysis of multidrug‐resistant hospital outbreaks of Klebsiella pneumoniae H Chung The, A Karkey, D Pham Thanh, CJ Boinett, AK Cain, M Ellington, ... EMBO molecular medicine 7 (3), 227-239, 2015 | 96 | 2015 |
| The induction and identification of novel Colistin resistance mutations in Acinetobacter baumannii and their implications N Thi Khanh Nhu, DW Riordan, T Do Hoang Nhu, DP Thanh, G Thwaites, ... Scientific reports 6 (1), 28291, 2016 | 95 | 2016 |
| The Microbiological and Clinical Characteristics of Invasive Salmonella in Gallbladders from Cholecystectomy Patients in Kathmandu, Nepal S Dongol, CN Thompson, S Clare, TVT Nga, PT Duy, A Karkey, A Arjyal, ... Public Library of Science 7 (10), e47342, 2012 | 78 | 2012 |
| The Sudden Dominance of blaCTX–M Harbouring Plasmids in Shigella spp. Circulating in Southern Vietnam NTK Nhu, H Vinh, TVT Nga, R Stabler, PT Duy, L Thi Minh Vien, ... PLoS neglected tropical diseases 4 (6), e702, 2010 | 74 | 2010 |
| A prospective multi-center observational study of children hospitalized with diarrhea in Ho Chi Minh City, Vietnam CN Thompson, MVT Phan, NVM Hoang, P Van Minh, NT Vinh, CT Thuy, ... The American journal of tropical medicine and hygiene 92 (5), 1045, 2015 | 73 | 2015 |
