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James J Collins
James J Collins
MIT; Wyss Institute, Harvard; Broad Institute of MIT & Harvard
Verified email at mit.edu - Homepage
Title
Cited by
Cited by
Year
Construction of a genetic toggle switch in Escherichia coli
TS Gardner, CR Cantor, JJ Collins
Nature 403 (6767), 339-342, 2000
53032000
A practical method for calculating largest Lyapunov exponents from small data sets
MT Rosenstein, JJ Collins, CJ De Luca
Physica D: Nonlinear Phenomena 65 (1-2), 117-134, 1993
44801993
Highly efficient reprogramming to pluripotency and directed differentiation of human cells with synthetic modified mRNA
L Warren, PD Manos, T Ahfeldt, YH Loh, H Li, F Lau, W Ebina, PK Mandal, ...
Cell stem cell 7 (5), 618-630, 2010
33462010
A common mechanism of cellular death induced by bactericidal antibiotics
MA Kohanski, DJ Dwyer, B Hayete, CA Lawrence, JJ Collins
Cell 130 (5), 797-810, 2007
31602007
Stochasticity in gene expression: from theories to phenotypes
M Kaern, TC Elston, WJ Blake, JJ Collins
Nature Reviews Genetics 6 (6), 451-464, 2005
27262005
How antibiotics kill bacteria: from targets to networks
MA Kohanski, DJ Dwyer, JJ Collins
Nature Reviews Microbiology 8 (6), 423-435, 2010
27072010
Nucleic acid detection with CRISPR-Cas13a/C2c2
JS Gootenberg, OO Abudayyeh, JW Lee, P Essletzbichler, AJ Dy, J Joung, ...
Science 356 (6336), 438-442, 2017
27032017
Gene-expression profiles and transcriptional regulatory pathways that underlie the identity and diversity of mouse tissue macrophages
EL Gautier, T Shay, J Miller, M Greter, C Jakubzick, S Ivanov, J Helft, ...
Nature immunology 13 (11), 1118-1128, 2012
20632012
Noise in eukaryotic gene expression
WJ Blake, M Kærn, CR Cantor, JJ Collins
Nature 422 (6932), 633-637, 2003
19572003
Multiplexed and portable nucleic acid detection platform with Cas13, Cas12a, and Csm6
JS Gootenberg, OO Abudayyeh, MJ Kellner, J Joung, JJ Collins, F Zhang
Science 360 (6387), 439-444, 2018
19132018
Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles
JJ Faith, B Hayete, JT Thaden, I Mogno, J Wierzbowski, G Cottarel, ...
PLoS biology 5 (1), e8, 2007
18692007
The Immunological Genome Project: networks of gene expression in immune cells
TSP Heng, MW Painter, the Immunological Genome Project Consortium, ...
Nature immunology 9 (10), 1091-1094, 2008
18082008
Wisdom of crowds for robust gene network inference
D Marbach, JC Costello, R Küffner, NM Vega, RJ Prill, DM Camacho, ...
Nature methods 9 (8), 796-804, 2012
18012012
Synthetic biology: applications come of age
AS Khalil, JJ Collins
Nature Reviews Genetics 11 (5), 367-379, 2010
16622010
A deep learning approach to antibiotic discovery
JM Stokes, K Yang, K Swanson, W Jin, A Cubillos-Ruiz, NM Donghia, ...
Cell 180 (4), 688-702. e13, 2020
16102020
Open-loop and closed-loop control of posture: a random-walk analysis of center-of-pressure trajectories
JJ Collins, CJ De Luca
Experimental brain research 95, 308-318, 1993
15531993
Highly efficient Cas9-mediated transcriptional programming
A Chavez, J Scheiman, S Vora, BW Pruitt, M Tuttle, E PR Iyer, S Lin, ...
Nature methods 12 (4), 326-328, 2015
15342015
Inferring genetic networks and identifying compound mode of action via expression profiling
TS Gardner, D Di Bernardo, D Lorenz, JJ Collins
Science 301 (5629), 102-105, 2003
14752003
Rapid, low-cost detection of Zika virus using programmable biomolecular components
K Pardee, AA Green, MK Takahashi, D Braff, G Lambert, JW Lee, ...
Cell 165 (5), 1255-1266, 2016
13372016
Cellular decision making and biological noise: from microbes to mammals
G Balázsi, A Van Oudenaarden, JJ Collins
Cell 144 (6), 910-925, 2011
11202011
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Articles 1–20