| The genomic sequence of the Chinese hamster ovary (CHO)-K1 cell line X Xu, H Nagarajan, NE Lewis, S Pan, Z Cai, X Liu, W Chen, M Xie, ... Nature biotechnology 29 (8), 735-741, 2011 | 729 | 2011 |
| Constraining the metabolic genotype–phenotype relationship using a phylogeny of in silico methods NE Lewis, H Nagarajan, BO Palsson Nature Reviews Microbiology 10 (4), 291-305, 2012 | 715 | 2012 |
| Genomic landscapes of Chinese hamster ovary cell lines as revealed by the Cricetulus griseus draft genome NE Lewis, X Liu, Y Li, H Nagarajan, G Yerganian, E O'Brien, A Bordbar, ... Nature biotechnology 31 (8), 759-765, 2013 | 349 | 2013 |
| The microbiome extends to subepidermal compartments of normal skin T Nakatsuji, HI Chiang, SB Jiang, H Nagarajan, K Zengler, RL Gallo Nature communications 4, 1431, 2013 | 322 | 2013 |
| MS/MS networking guided analysis of molecule and gene cluster families DD Nguyen, CH Wu, WJ Moree, A Lamsa, MH Medema, X Zhao, ... Proceedings of the National Academy of Sciences 110 (28), E2611-E2620, 2013 | 216 | 2013 |
| Proteomic analysis of Chinese hamster ovary cells D Baycin-Hizal, DL Tabb, R Chaerkady, L Chen, NE Lewis, H Nagarajan, ... Journal of proteome research 11 (11), 5265-5276, 2012 | 148 | 2012 |
| A Consensus Genome-scale Reconstruction of Chinese Hamster Ovary Cell Metabolism H Hefzi, KS Ang, M Hanscho, A Bordbar, D Ruckerbauer, M Lakshmanan, ... Cell Systems 3 (5), 434-443. e8, 2016 | 146 | 2016 |
| A Consensus Genome-scale Reconstruction of Chinese Hamster Ovary Cell Metabolism M Lakshmanan, CA Orellana, D Baycin-Hizal, Y Huang, D Ley, T Wulff, ... | 146* | |
| Characterizing acetogenic metabolism using a genome-scale metabolic reconstruction of Clostridium ljungdahlii H Nagarajan, M Sahin, J Nogales, H Latif, DR Lovley, A Ebrahim, ... Microb Cell Fact 12, 118, 2013 | 116 | 2013 |
| Single-cell genome and metatranscriptome sequencing reveal metabolic interactions of an alkane-degrading methanogenic community M Embree, H Nagarajan, N Movahedi, H Chitsaz, K Zengler The ISME journal 8 (4), 757-767, 2014 | 112 | 2014 |
| Comparative analysis of regulatory elements between Escherichia coli and Klebsiella pneumoniae by genome-wide transcription start site profiling D Kim, JS Hong, Y Qiu, H Nagarajan, JH Seo, BK Cho, SF Tsai, ... PLoS Genet 8 (8), e1002867, 2012 | 110 | 2012 |
| Characterization and modelling of interspecies electron transfer mechanisms and microbial community dynamics of a syntrophic association H Nagarajan, M Embree, AE Rotaru, PM Shrestha, AM Feist, BØ Palsson, ... Nature communications 4, 2013 | 87 | 2013 |
| Exploiting adaptive laboratory evolution of Streptomyces clavuligerus for antibiotic discovery and overproduction P Charusanti, NL Fong, H Nagarajan, AR Pereira, HJ Li, EA Abate, Y Su, ... PLoS One 7 (3), e33727, 2012 | 80 | 2012 |
| Determining the control circuitry of redox metabolism at the genome-scale S Federowicz, D Kim, A Ebrahim, J Lerman, H Nagarajan, BK Cho, ... PLoS Genet 10 (4), e1004264, 2014 | 52 | 2014 |
| Do Genome-scale Models Need Exact Solvers or Clearer Standards? A Ebrahim, E Almaas, E Bauer, A Bordbar, AP Burgard, RL Chang, ... Molecular Systems Biology, 2015 | 51 | 2015 |
| Minimal metabolic pathway structure is consistent with associated biomolecular interactions A Bordbar, H Nagarajan, NE Lewis, H Latif, A Ebrahim, S Federowicz, ... Molecular systems biology 10 (7), 737, 2014 | 45 | 2014 |
| De novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads H Nagarajan, JE Butler, A Klimes, Y Qiu, K Zengler, J Ward, ND Young, ... PloS one 5 (6), e10922, 2010 | 43 | 2010 |
| DyNAVacS: an integrative tool for optimized DNA vaccine design N Harish, R Gupta, P Agarwal, V Scaria, B Pillai Nucleic acids research 34 (suppl 2), W264-W266, 2006 | 40 | 2006 |
| The genome organization of Thermotoga maritima reflects its lifestyle H Latif, JA Lerman, VA Portnoy, Y Tarasova, H Nagarajan, ... | 35 | 2013 |
| Constraint-based modeling of carbon fixation and the energetics of electron transfer in Geobacter metallireducens AM Feist, H Nagarajan, AE Rotaru, PL Tremblay, T Zhang, KP Nevin, ... PLoS Comput Biol 10, e1003575, 2014 | 32 | 2014 |
Bernhard PalssonUCSDVerified email at eng.ucsd.edu
