ProThermDB: thermodynamic database for proteins and mutants revisited after 15 years R Nikam, A Kulandaisamy, K Harini, D Sharma, MM Gromiha Nucleic Acids Research 49 (D1), D420-D424, 2021 | 136 | 2021 |
ProNAB: database for binding affinities of protein–nucleic acid complexes and their mutants K Harini, A Srivastava, A Kulandaisamy, MM Gromiha Nucleic Acids Research 50 (D1), D1528-D1534, 2022 | 22 | 2022 |
Impact of AlphaFold on structure prediction of protein complexes: the CASP15‐CAPRI experiment MF Lensink, G Brysbaert, N Raouraoua, PA Bates, M Giulini, RV Honorato, ... Proteins: Structure, Function, and Bioinformatics 91 (12), 1658-1683, 2023 | 16 | 2023 |
PDA-Pred: Predicting the binding affinity of protein-DNA complexes using machine learning techniques and structural features K Harini, D Kihara, MM Gromiha Methods 213, 10-17, 2023 | 8 | 2023 |
PRA-Pred: Structure-based prediction of protein-RNA binding affinity K Harini, M Sekijima, MM Gromiha International Journal of Biological Macromolecules 259, 129490, 2024 | 3 | 2024 |
Thermodynamic database supports deciphering protein-nucleic acid interactions LC Mei, GF Hao, GF Yang Trends in biotechnology, 2023 | 3 | 2023 |
Pairwise and Multi-chain Protein Docking Enhanced Using LZerD Web Server K Harini, C Christoffer, MM Gromiha, D Kihara Protein-Protein Interactions: Methods and Protocols, 355-373, 2023 | 2 | 2023 |
Assembly of Protein Complexes In and On the Membrane with Predicted Spatial Arrangement Constraints C Christoffer, K Harini, G Archit, D Kihara Journal of Molecular Biology, 168486, 2024 | 1 | 2024 |
Illustrative Tutorials for ProThermDB: Thermodynamic Database for Proteins and Mutants A Kulandaisamy, R Nikam, K Harini, D Sharma, MM Gromiha Current Protocols 1 (11), e306, 2021 | | 2021 |