| AMRFinderPlus and the Reference Gene Catalog facilitate examination of the genomic links among antimicrobial resistance, stress response, and virulence M Feldgarden, V Brover, N Gonzalez-Escalona, JG Frye, J Haendiges, ... Scientific reports 11 (1), 12728, 2021 | 424 | 2021 |
| Genomics of foodborne pathogens for microbial food safety MW Allard, R Bell, CM Ferreira, N Gonzalez-Escalona, M Hoffmann, ... Current opinion in biotechnology 49, 224-229, 2018 | 160 | 2018 |
| Tracing Origins of the Salmonella Bareilly Strain Causing a Food-borne Outbreak in the United States M Hoffmann, Y Luo, SR Monday, N Gonzalez-Escalona, AR Ottesen, ... The Journal of Infectious Diseases 213 (4), 502-508, 2016 | 154 | 2016 |
| Comparative analysis of extended-spectrum-β-lactamase CTX-M-65-producing Salmonella enterica serovar Infantis isolates from humans, food animals, and retail chickens in the … H Tate, JP Folster, CH Hsu, J Chen, M Hoffmann, C Li, C Morales, ... Antimicrobial Agents and Chemotherapy 61 (7), 10.1128/aac. 00488-17, 2017 | 149 | 2017 |
| Comparative Genomic Analysis and Virulence Differences in Closely Related Salmonella enterica Serotype Heidelberg Isolates from Humans, Retail Meats, and … M Hoffmann, S Zhao, J Pettengill, Y Luo, SR Monday, J Abbott, SL Ayers, ... Genome biology and evolution 6 (5), 1046-1068, 2014 | 138 | 2014 |
| Presence of disinfectant resistance genes in Escherichia coli isolated from retail meats in the USA L Zou, J Meng, PF McDermott, F Wang, Q Yang, G Cao, M Hoffmann, ... Journal of Antimicrobial Chemotherapy 69 (10), 2644-2649, 2014 | 122 | 2014 |
| Whole-genome sequencing of gentamicin-resistant Campylobacter coli isolated from US retail meats reveals novel plasmid-mediated aminoglycoside resistance genes Y Chen, S Mukherjee, M Hoffmann, ML Kotewicz, S Young, J Abbott, ... Antimicrobial Agents and Chemotherapy 57 (11), 5398-5405, 2013 | 96 | 2013 |
| AMRFinderPlus and the Reference Gene Catalog facilitate examination of the genomic links among antimicrobial resistance, stress response, and virulence. Sci Rep 11: 12728 M Feldgarden, V Brover, N Gonzalez-Escalona, JG Frye, J Haendiges, ... | 80 | 2021 |
| In vivo commensal control of Clostridioides difficile virulence BP Girinathan, N DiBenedetto, JN Worley, J Peltier, ML Arrieta-Ortiz, ... Cell Host & Microbe 29 (11), 1693-1708. e7, 2021 | 73 | 2021 |
| Nanopore sequencing for fast determination of plasmids, phages, virulence markers, and antimicrobial resistance genes in Shiga toxin-producing Escherichia coli N Gonzalez-Escalona, MA Allard, EW Brown, S Sharma, M Hoffmann PLoS One 14 (7), e0220494, 2019 | 72 | 2019 |
| Genome sequence, assembly and characterization of two Metschnikowia fructicola strains used as biocontrol agents of postharvest diseases E Piombo, N Sela, M Wisniewski, M Hoffmann, ML Gullino, MW Allard, ... Frontiers in microbiology 9, 348178, 2018 | 62 | 2018 |
| Role of DNA methyl-CpG-binding protein MeCP2 in Rett syndrome pathobiology and mechanism of disease S Pejhan, M Rastegar Biomolecules 11 (1), 75, 2021 | 60* | 2021 |
| PCR-based method for targeting 16S-23S rRNA intergenic spacer regions among Vibrio species M Hoffmann, EW Brown, PCH Feng, CE Keys, M Fischer, SR Monday BMC microbiology 10, 1-14, 2010 | 60 | 2010 |
| Vibrio caribbeanicus sp. nov., isolated from the marine sponge Scleritoderma cyanea M Hoffmann, SR Monday, MW Allard, EA Strain, P Whittaker, M Naum, ... International journal of systematic and evolutionary microbiology 62 (Pt_8 …, 2012 | 55 | 2012 |
| Genomic features of colistin resistant Escherichia coli ST69 strain harboring mcr-1 on IncHI2 plasmid from raw milk cheese in Egypt AM Hammad, M Hoffmann, N Gonzalez-Escalona, NH Abbas, K Yao, ... Infection, Genetics and Evolution 73, 126-131, 2019 | 49 | 2019 |
| Genetic and phylogenetic evidence for misidentification of Vibrio species within the Harveyi clade M Hoffmann, SR Monday, M Fischer, EW Brown Letters in applied microbiology 54 (2), 160-165, 2012 | 49 | 2012 |
| Genome-wide methylation patterns in Salmonella enterica subsp. enterica serovars C Pirone-Davies, M Hoffmann, RJ Roberts, T Muruvanda, RE Timme, ... PloS one 10 (4), e0123639, 2015 | 47 | 2015 |
| Genomics of Corynebacterium striatum, an emerging multidrug-resistant pathogen of immunocompromised patients K Nudel, X Zhao, S Basu, X Dong, M Hoffmann, M Feldgarden, M Allard, ... Clinical Microbiology and Infection 24 (9), 1016. e7-1016. e13, 2018 | 46 | 2018 |
| Novel linezolid resistance plasmids in Enterococcus from food animals in the USA GH Tyson, JL Sabo, M Hoffmann, CH Hsu, S Mukherjee, J Hernandez, ... Journal of Antimicrobial Chemotherapy 73 (12), 3254-3258, 2018 | 43 | 2018 |
| Genes significantly associated with lineage II food isolates of Listeria monocytogenes C Pirone-Davies, Y Chen, A Pightling, G Ryan, Y Wang, K Yao, ... BMC genomics 19, 1-11, 2018 | 43 | 2018 |
Marc W AllardFDA CFSAN ORSVerified email at fda.hhs.gov
