Haplotype-aware variant calling with PEPPER-Margin-DeepVariant enables high accuracy in nanopore long-reads K Shafin, T Pesout, PC Chang, M Nattestad, A Kolesnikov, S Goel, G Baid, ... Nature methods 18 (11), 1322-1332, 2021 | 153 | 2021 |
PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions ND Olson, J Wagner, J McDaniel, SH Stephens, ST Westreich, ... Cell genomics 2 (5), 2022 | 116 | 2022 |
Haplotype-aware variant calling enables high accuracy in nanopore long-reads using deep neural networks K Shafin, T Pesout, PC Chang, M Nattestad, A Kolesnikov, S Goel, G Baid, ... BioRxiv, 2021.03. 04.433952, 2021 | 34 | 2021 |
DeepTrio: variant calling in families using deep learning A Kolesnikov, S Goel, M Nattestad, T Yun, G Baid, H Yang, CY McLean, ... bioRxiv, 2021.04. 05.438434, 2021 | 16 | 2021 |
An extensive sequence dataset of gold-standard samples for benchmarking and development G Baid, M Nattestad, A Kolesnikov, S Goel, H Yang, PC Chang, A Carroll bioRxiv, 2020.12. 11.422022, 2020 | 15 | 2020 |
Improving variant calling using population data and deep learning NC Chen, A Kolesnikov, S Goel, T Yun, PC Chang, A Carroll BMC bioinformatics 24 (1), 197, 2023 | 6 | 2023 |
DeepVariant: Deep Learning for Genomic Variant Calling. S Goel AAAI Spring Symposium: Interpretable AI for Well-being, 2019 | | 2019 |
Optimism can be boundedly rational F Lieder, S Goel, R Kwan, TL Griffiths | | |
The optimism bias may support rational action F Lieder, S Goel, R Kwan, TL Griffiths | | |