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Bing Zhang
Bing Zhang
Professor of Molecular and Human Genetics, Baylor College of Medicine
Verified email at bcm.edu - Homepage
Title
Cited by
Cited by
Year
WebGestalt 2019: gene set analysis toolkit with revamped UIs and APIs
Y Liao, J Wang, EJ Jaehnig, Z Shi, B Zhang
Nucleic acids research 47 (W1), W199-W205, 2019
23502019
WebGestalt: an integrated system for exploring gene sets in various biological contexts
B Zhang, S Kirov, J Snoddy
Nucleic acids research 33 (suppl_2), W741-W748, 2005
19732005
WEB-based GEne SeT AnaLysis Toolkit (WebGestalt): update 2013
J Wang, D Duncan, Z Shi, B Zhang
Nucleic acids research 41 (W1), W77-W83, 2013
17212013
LinkedOmics: analyzing multi-omics data within and across 32 cancer types
SV Vasaikar, P Straub, J Wang, B Zhang
Nucleic acids research 46 (D1), D956-D963, 2018
16522018
Proteogenomics connects somatic mutations to signalling in breast cancer
P Mertins, M DR, R KV, G MA, C KR, W P, W X, Q JW, C S, P F, K E, M F, ...
Nature 534 (7605), 55-62, 2016
15262016
Proteogenomic characterization of human colon and rectal cancer
B Zhang, J Wang, X Wang, J Zhu, Q Liu, Z Shi, MC Chambers, ...
Nature 513 (7518), 382-387, 2014
13862014
WebGestalt 2017: a more comprehensive, powerful, flexible and interactive gene set enrichment analysis toolkit
J Wang, S Vasaikar, Z Shi, M Greer, B Zhang
Nucleic acids research 45 (W1), W130-W137, 2017
9972017
Integrated proteogenomic characterization of human high-grade serous ovarian cancer
H Zhang, T Liu, Z Zhang, SH Payne, B Zhang, JE McDermott, JY Zhou, ...
Cell 166 (3), 755-765, 2016
8832016
How many human proteoforms are there?
R Aebersold, JN Agar, IJ Amster, MS Baker, CR Bertozzi, ES Boja, ...
Nature chemical biology 14 (3), 206-214, 2018
7572018
Integrated Proteogenomic Characterization of HBV-Related Hepatocellular Carcinoma
Q Gao, H Zhu, L Dong, W Shi, R Chen, Z Song, C Huang, J Li, X Dong, ...
Cell 179 (2), 561-577. e22, 2019
7152019
Experimentally derived metastasis gene expression profile predicts recurrence and death in patients with colon cancer
JJ Smith, NG Deane, F Wu, NB Merchant, B Zhang, A Jiang, P Lu, ...
Gastroenterology 138 (3), 958-968, 2010
6772010
Elevated NRAS expression during DCIS is a potential driver for progression to basal-like properties and local invasiveness
ZY Zheng, H Elsarraj, JT Lei, Y Hong, M Anurag, L Feng, H Kennedy, ...
Breast Cancer Research 24 (1), 1-11, 2022
5722022
Proteogenomic analysis of human colon cancer reveals new therapeutic opportunities
S Vasaikar, C Huang, X Wang, VA Petyuk, SR Savage, B Wen, Y Dou, ...
Cell 177 (4), 1035-1049. e19, 2019
5562019
GOTree Machine (GOTM): a web-based platform for interpreting sets of interesting genes using Gene Ontology hierarchies
B Zhang, D Schmoyer, S Kirov, J Snoddy
BMC bioinformatics 5 (1), 16, 2004
5542004
Detecting differential and correlated protein expression in label-free shotgun proteomics
B Zhang, NC VerBerkmoes, MA Langston, E Uberbacher, RL Hettich, ...
Journal of proteome research 5 (11), 2909-2918, 2006
4762006
Proteogenomic characterization reveals therapeutic vulnerabilities in lung adenocarcinoma
MA Gillette, S Satpathy, S Cao, SM Dhanasekaran, SV Vasaikar, K Krug, ...
Cell 182 (1), 200-225. e35, 2020
4432020
Integrated proteogenomic characterization of clear cell renal cell carcinoma
DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ...
Cell 179 (4), 964-983. e31, 2019
4362019
Proteomic parsimony through bipartite graph analysis improves accuracy and transparency
B Zhang, MC Chambers, DL Tabb
Journal of proteome research 6 (9), 3549-3557, 2007
3932007
Proteogenomic and metabolomic characterization of human glioblastoma
LB Wang, A Karpova, MA Gritsenko, JE Kyle, S Cao, Y Li, D Rykunov, ...
Cancer cell 39 (4), 509-528. e20, 2021
3762021
KRAS-dependent sorting of miRNA to exosomes
DJ Cha, JL Franklin, Y Dou, Q Liu, JN Higginbotham, MD Beckler, ...
Elife 4, e07197, 2015
3692015
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