| Genome biology of the paleotetraploid perennial biomass crop Miscanthus T Mitros, AM Session, BT James, GA Wu, MB Belaffif, LV Clark, S Shu, ... Nature communications 11 (1), 1-11, 2020 | 79 | 2020 |
| Sequencing framework for the sensitive detection and precise mapping of defective interfering particle-associated deletions across influenza A and B viruses FG Alnaji, JR Holmes, G Rendon, JC Vera, CJ Fields, BE Martin, ... Journal of virology 93 (11), e00354-19, 2019 | 50 | 2019 |
| ZFNGenome: a comprehensive resource for locating zinc finger nuclease target sites in model organisms D Reyon, JR Kirkpatrick, JD Sander, F Zhang, DF Voytas, JK Joung, ... BMC genomics 12 (1), 1-9, 2011 | 50 | 2011 |
| A detailed gene expression study of the Miscanthus genus reveals changes in the transcriptome associated with the rejuvenation of spring rhizomes A Barling, K Swaminathan, T Mitros, BT James, J Morris, O Ngamboma, ... BMC genomics 14 (1), 1-16, 2013 | 40 | 2013 |
| Using a multiple-delivery-mode training approach to develop local capacity and infrastructure for advanced bioinformatics in Africa V Ras, G Botha, S Aron, K Lennard, I Allali, S Claassen-Weitz, ... PLoS computational biology 17 (2), e1008640, 2021 | 12 | 2021 |
| Field pathogenomics of Fusarium head blight reveals pathogen transcriptome differences due to host resistance LA Fall, MM Salazar, J Drnevich, JR Holmes, MC Tseng, FL Kolb, ... Mycologia 111 (4), 563-573, 2019 | 11 | 2019 |
| Illumina-based sequencing framework for accurate detection and mapping of influenza virus defective interfering particle-associated RNAs FG Alnaji, JR Holmes, G Rendon, JC Vera, CJ Fields, BE Martin, ... bioRxiv, 440651, 2018 | 3 | 2018 |
| Construction and analysis of the Miscanthus genespace J Kirkpatrick | 2 | 2014 |
| Bioinformatic Identification and Phylogenetic Analysis of Putative Chemosensory Receptors in Adult Northern Leopard Frog (Lithobates pipiens) from RNA-Seq Data P Gong, BM Graham, JR Holmes, AS Maxwell, CJ Fields, C Zhang, ... MCBIOS XV, 2018 | | 2018 |
| A Metagenomic Approach to the Characterization of the Microbiomes of Sickle Cell Disease-associated Leg Ulcers D Fasesan, J Holmes, J Zadeh, A Ogunkeyede, G Falusi, V Jongeneel, ... ISCB Africa ASBCB Conference on Bioinformatics 2017, 2017 | | 2017 |
