| Prediction of overall survival for patients with metastatic castration-resistant prostate cancer: development of a prognostic model through a crowdsourced challenge with open … J Guinney, T Wang, TD Laajala, KK Winner, JC Bare, EC Neto, SA Khan, ... The Lancet Oncology 18 (1), 132-142, 2017 | 161 | 2017 |
| Prediction of human population responses to toxic compounds by a collaborative competition F Eduati, LM Mangravite, T Wang, H Tang, JC Bare, R Huang, T Norman, ... Nature biotechnology 33 (9), 933-940, 2015 | 121 | 2015 |
| Single-cell measurement of plasmid copy number and promoter activity B Shao, J Rammohan, DA Anderson, N Alperovich, D Ross, CA Voigt Nature communications 12 (1), 1475, 2021 | 71 | 2021 |
| Identifying network topologies that can generate Turing pattern MM Zheng, B Shao, Q Ouyang Journal of Theoretical Biology 408, 88-96, 2016 | 40 | 2016 |
| A mathematical model for cell size control in fission yeast B Li, B Shao, C Yu, Q Ouyang, H Wang Journal of theoretical biology 264 (3), 771-781, 2010 | 18 | 2010 |
| Mitigating Host Burden of Genetic Circuits by Engineering Autonegatively Regulated Parts and Improving Functional Prediction Y Guan, X Chen, B Shao, X Ji, Y Xiang, G Jiang, L Xu, Z Lin, Q Ouyang, ... ACS Synthetic Biology 11 (7), 2361-2371, 2022 | 12 | 2022 |
| From boolean network model to continuous model helps in design of functional circuits B Shao, X Liu, D Zhang, J Wu, Q Ouyang PloS one 10 (6), e0128630, 2015 | 9 | 2015 |
| Protein expression patterns of the yeast mating response H Yuan, R Zhang, B Shao, X Wang, Q Ouyang, N Hao, C Luo Integrative Biology 8 (6), 712-719, 2016 | 8 | 2016 |
| Reconstructing the regulatory circuit of cell fate determination in yeast mating response B Shao, H Yuan, R Zhang, X Wang, S Zhang, Q Ouyang, N Hao, C Luo PLoS computational biology 13 (7), e1005671, 2017 | 6 | 2017 |
| Minimum network constraint on reverse engineering to develop biological regulatory networks B Shao, J Wu, B Tian, Q Ouyang Journal of theoretical biology 380, 9-15, 2015 | 6 | 2015 |
| A reverse engineering approach to optimize experiments for the construction of biological regulatory networks X Zhang, B Shao, Y Wu, O Qi PloS one 8 (9), e75931, 2013 | 6 | 2013 |
| Relationship between cancer mutations and parameter sensitivity in Rb pathway X Chen, J Chen, B Shao, L Zhao, H Yue, Q Ouyang Journal of theoretical biology 404, 120-125, 2016 | 2 | 2016 |
| Riboformer: a deep learning framework for predicting context-dependent translation dynamics B Shao, J Yan, J Zhang, L Liu, Y Chen, AR Buskirk Nature Communications 15 (1), 2011, 2024 | 1 | 2024 |
| A long-context language model for deciphering and generating bacteriophage genomes B Shao bioRxiv, 2023.12. 18.572218, 2023 | | 2023 |
| A simple method for in situ, multiplexed measurement of RNA degradation by flow cytometry J Rammohan, N Alperovich, B Shao, D Ross bioRxiv, 2021.09. 17.460772, 2021 | | 2021 |
| Development of a new measurement standard for synthetic circuit design B Shao, C Voigt APS March Meeting Abstracts 2019, A64. 006, 2019 | | 2019 |
