Kevin Y Yip
Kevin Y Yip
Sanford Burnham Prebys Medical Discovery Institute
Verified email at - Homepage
Cited by
Cited by
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
Architecture of the human regulatory network derived from ENCODE data
MB Gerstein, A Kundaje, M Hariharan, SG Landt, KK Yan, C Cheng, ...
Nature 489 (7414), 91-100, 2012
A User’s Guide to the Encyclopedia of DNA Elements (ENCODE)
ENCODE Project Consortium
PLoS Biol 9 (4), e1001046, 2011
Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project
MB Gerstein, ZJ Lu, EL Van Nostrand, C Cheng, BI Arshinoff, T Liu, ...
Science 330 (6012), 1775-1787, 2010
The International Human Epigenome Consortium: A Blueprint for Scientific Collaboration and Discovery
HG Stunnenberg, The International Human Epigenome Consortium, ...
Cell 167 (5), 1145-1149, 2016
Efficient clustering of uncertain data
WK Ngai, B Kao, CK Chui, R Cheng, M Chau, KY Yip
Sixth International Conference on Data Mining (ICDM'06), 436-445, 2006
Decision trees for uncertain data
S Tsang, B Kao, KY Yip, WS Ho, SD Lee
IEEE transactions on knowledge and data engineering 23 (1), 64-78, 2009
Comparative analysis of the transcriptome across distant species
MB Gerstein, J Rozowsky, KK Yan, D Wang, C Cheng, JB Brown, ...
Nature 512 (7515), 445-448, 2014
FunSeq2: a framework for prioritizing noncoding regulatory variants in cancer
Y Fu, Z Liu, S Lou, J Bedford, XJ Mu, KY Yip, E Khurana, M Gerstein
Genome biology 15 (10), 1-15, 2014
Classification of human genomic regions based on experimentally determined binding sites of more than 100 transcription-related factors
KY Yip, C Cheng, N Bhardwaj, JB Brown, J Leng, A Kundaje, J Rozowsky, ...
Genome biology 13 (9), 1-22, 2012
Extensive in vivo metabolite-protein interactions revealed by large-scale systematic analyses
X Li, TA Gianoulis, KY Yip, M Gerstein, M Snyder
Cell 143 (4), 639-650, 2010
Harp: A practical projected clustering algorithm
KY Yip, DW Cheung, MK Ng
IEEE Transactions on knowledge and data engineering 16 (11), 1387-1397, 2004
Exome and genome sequencing of nasopharynx cancer identifies NF-κB pathway activating mutations
YY Li, GTY Chung, VWY Lui, KF To, BBY Ma, C Chow, JK Woo, KY Yip, ...
Nature communications 8 (1), 1-10, 2017
Mining periodic patterns with gap requirement from sequences
M Zhang, B Kao, DW Cheung, KY Yip
ACM Transactions on Knowledge Discovery from Data (TKDD) 1 (2), 7-es, 2007
Understanding transcriptional regulation by integrative analysis of transcription factor binding data
C Cheng, R Alexander, R Min, J Leng, KY Yip, J Rozowsky, KK Yan, ...
Genome research 22 (9), 1658-1667, 2012
Whole-genome bisulfite sequencing of multiple individuals reveals complementary roles of promoter and gene body methylation in transcriptional regulation
S Lou, HM Lee, H Qin, JW Li, Z Gao, X Liu, LL Chan, VKL Lam, WY So, ...
Genome Biology 15 (7), 408, 2014
Reconstruction of enhancer–target networks in 935 samples of human primary cells, tissues and cell lines
Q Cao, C Anyansi, X Hu, L Xu, L Xiong, W Tang, MTS Mok, C Cheng, ...
Nature Genetics 201, 7, 2017
YeastHub: a semantic web use case for integrating data in the life sciences domain
KH Cheung, KY Yip, A Smith, R Deknikker, A Masiar, M Gerstein
Bioinformatics 21 (suppl_1), i85-i96, 2005
A statistical framework for modeling gene expression using chromatin features and application to modENCODE datasets
C Cheng, KK Yan, KY Yip, J Rozowsky, R Alexander, C Shou, M Gerstein
Genome biology 12 (2), 1-18, 2011
Improved reconstruction of in silico gene regulatory networks by integrating knockout and perturbation data
KY Yip, RP Alexander, KK Yan, M Gerstein
PloS one 5 (1), e8121, 2010
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