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Kosuke Ogata
Kosuke Ogata
Verified email at kyoto-u.ac.jp
Title
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Cited by
Year
Extending the Separation Space with Trapped Ion Mobility Spectrometry Improves the Accuracy of Isobaric Tag-Based Quantitation in Proteomic LC/MS/MS
K Ogata, Y Ishihama
Analytical Chemistry 92 (12), 8037-8040, 2020
362020
Phosphatidylserine-deficient small extracellular vesicle is a major somatic cell-derived sEV subpopulation in blood
A Matsumoto, Y Takahashi, K Ogata, S Kitamura, N Nakagawa, ...
Iscience 24 (8), 102839, 2021
232021
Sequence-Specific Model for Predicting Peptide Collision Cross Section Values in Proteomic Ion Mobility Spectrometry
CH Chang, D Yeung, V Spicer, K Ogata, O Krokhin, Y Ishihama
Journal of Proteome Research 20 (7), 3600-3610, 2021
172021
Acetic Acid Ion Pairing Additive for Reversed-Phase HPLC Improves Detection Sensitivity in Bottom-up Proteomics Compared to Formic Acid
T Battellino, K Ogata, V Spicer, Y Ishihama, O Krokhin
Journal of Proteome Research 22 (1), 272-278, 2022
142022
IRAK1-dependent Regnase-1-14-3-3 complex formation controls Regnase-1-mediated mRNA decay
K Akaki, K Ogata, Y Yamauchi, N Iwai, KM Tse, F Hia, A Mochizuki, ...
Elife 10, e71966, 2021
142021
Motif-centric phosphoproteomics to target kinase-mediated signaling pathways
CF Tsai, K Ogata, N Sugiyama, Y Ishihama
Cell reports methods 2 (1), 100138, 2022
132022
Effect of Phosphorylation on the Collision Cross Sections of Peptide Ions in Ion Mobility Spectrometry
K Ogata, CH Chang, Y Ishihama
Mass Spectrometry, A0093, 2020
132020
Nanoscale Solid-Phase Isobaric Labeling for Multiplexed Quantitative Phosphoproteomics
K Ogata, CF Tsai, Y Ishihama
Journal of Proteome Research 20 (8), 4193-4202, 2021
92021
CoolTip: Low-Temperature Solid-Phase Extraction Microcolumn for Capturing Hydrophilic Peptides and Phosphopeptides
K Ogata, Y Ishihama
Molecular & Cellular Proteomics 20, 2021
92021
Retention Order Reversal of Phosphorylated and Unphosphorylated Peptides in Reversed-Phase LC/MS
K Ogata, OV Krokhin, Y Ishihama
Analytical Sciences 34 (9), 1037-1041, 2018
82018
One thousand samples per day capillary-flow LC/MS/MS for high-speed, high-sensitivity and in-depth proteomics
A Tomioka, R Tomioka, I Mori, Y Isobe, M Arita, K Imami, E Kanao, ...
bioRxiv, 2023.06. 05.543682, 2023
12023
Temperature Dependence of Retention Behavior of Phosphorylated Peptides in Ion-Pair Reversed-Phase Liquid Chromatography
K OGATA, Y ISHIHAMA
CHROMATOGRAPHY 43 (3), 137-141, 2022
12022
Ubiquitination at the lysine 27 residue of the Parkin ubiquitin-like domain is suggestive of a new mechanism of Parkin activation
JY Liu, T Inoshita, K Shiba-Fukushima, S Yoshida, K Ogata, Y Ishihama, ...
Human Molecular Genetics 31 (15), 2623-2638, 2022
12022
Retention time prediction for post-translationally modified peptides: Ser, Thr, Tyr phosphorylation
T Battellino, D Yeung, H Neustaeter, V Spicer, K Ogata, Y Ishihama, ...
Journal of Chromatography A, 464714, 2024
2024
Extending the Coverage of Lys-C/Trypsin-Based Bottom-up Proteomics by Cysteine S-Aminoethylation
R Tomioka, A Tomioka, K Ogata, HJ Chan, LY Chen, UH Guzman, Y Xuan, ...
Journal of the American Society for Mass Spectrometry, 2024
2024
Motif-Targeting Phosphoproteome Analysis of Cancer Cells for Profiling Kinase Inhibitors
K Ogata, S Takagi, N Sugiyama, Y Ishihama
Cancers 15 (1), 78, 2022
2022
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