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Emily Kaczmarek
Emily Kaczmarek
Verified email at mail.mcgill.ca
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Multi-omic graph transformers for cancer classification and interpretation
E Kaczmarek, A Jamzad, T Imtiaz, J Nanayakkara, N Renwick, P Mousavi
PACIFIC SYMPOSIUM ON BIOCOMPUTING 2022, 373-384, 2021
112021
Diagnosing PTSD using electronic medical records from Canadian primary care data
E Kaczmarek, A Salgo, H Zafari, L Kosowan, A Singer, F Zulkernine
Proceedings of the 6th International Conference on Networking, Systems and …, 2019
62019
Discriminating neoplastic from nonneoplastic tissues using an miRNA-based deep cancer classifier
E Kaczmarek, B Pyman, J Nanayakkara, T Tuschl, K Tyryshkin, ...
The American Journal of Pathology 192 (2), 344-352, 2022
32022
CAManim: Animating end-to-end network activation maps
E Kaczmarek, OX Miguel, AC Bowie, R Ducharme, ALJ Dingwall-Harvey, ...
arXiv preprint arXiv:2312.11772, 2023
12023
Deep learning prediction of renal anomalies for prenatal ultrasound diagnosis
OX Miguel, E Kaczmarek, I Lee, R Ducharme, ALJ Dingwall-Harvey, ...
Scientific Reports 14 (1), 9013, 2024
2024
A user-driven machine learning approach for RNA-based sample discrimination and hierarchical classification
T Imtiaz, J Nanayakkara, A Fang, D Jomaa, H Mayotte, S Damiani, ...
STAR Protocols 4 (4), 102661, 2023
2023
MetaCAM: Ensemble-Based Class Activation Map
E Kaczmarek, OX Miguel, AC Bowie, R Ducharme, ALJ Dingwall-Harvey, ...
arXiv preprint arXiv:2307.16863, 2023
2023
Topology preserving stratification of tissue neoplasticity using Deep Neural Maps and microRNA signatures
E Kaczmarek, J Nanayakkara, A Sedghi, M Pesteie, T Tuschl, N Renwick, ...
BMC bioinformatics 23, 1-18, 2022
2022
Classifying and Understanding Cancer Through microRNA-Based Deep Learning
E Kaczmarek
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