sRNAbench and sRNAtoolbox 2019: intuitive fast small RNA profiling and differential expression E Aparicio-Puerta, R Lebrón, A Rueda, C Gómez-Martín, S Giannoukakos, ... Nucleic acids research 47 (W1), W530-W535, 2019 | 158 | 2019 |
sRNAbench and sRNAtoolbox 2022 update: accurate miRNA and sncRNA profiling for model and non-model organisms E Aparicio-Puerta, C Gómez-Martín, S Giannoukakos, JM Medina, ... Nucleic acids research 50 (W1), W710-W717, 2022 | 32 | 2022 |
mirnaQC: a webserver for comparative quality control of miRNA-seq data E Aparicio-Puerta, C Gómez-Martín, S Giannoukakos, JM Medina, ... Nucleic acids research 48 (W1), W262-W267, 2020 | 24 | 2020 |
Bioinformatic Analysis of Ixodes ricinus Long Non-Coding RNAs Predicts Their Binding Ability of Host miRNAs JM Medina, MN Abbas, C Bensaoud, M Hackenberg, M Kotsyfakis International Journal of Molecular Sciences 23 (17), 9761, 2022 | 9 | 2022 |
Reassessment of miRNA variant (isomiRs) composition by small RNA sequencing C Gómez-Martín, E Aparicio-Puerta, MAJ van Eijndhoven, JM Medina, ... Cell Reports Methods 3 (5), 2023 | 8 | 2023 |
Transcriptomic analysis of the tick midgut and salivary gland responses upon repeated blood-feeding on a vertebrate host JM Medina, MA Jmel, B Cuveele, C Gómez-Martín, E Aparicio-Puerta, ... Frontiers in cellular and infection microbiology 12, 919786, 2022 | 7 | 2022 |
Quantitative proteomics analysis reveals core and variable tick salivary proteins at the tick‐vertebrate host interface C Bensaoud, S Tenzer, A Poplawski, JM Medina, MA Jmel, H Voet, ... Molecular Ecology 31 (15), 4162-4175, 2022 | 5 | 2022 |
Unbiased and UMI-informed sequencing of cell-free miRNAs at single-nucleotide resolution MAJ van Eijndhoven, E Aparicio-Puerta, C Gómez-Martín, JM Medina, ... bioRxiv, 2021.05. 04.442244, 2021 | 3 | 2021 |
Comprehensive, integrative genomic analysis of microRNA expression profiles in different tissues of two wheat cultivars with different traits C Gómez-Martín, H Zhou, JM Medina, E Aparicio-Puerta, M Hackenberg, ... Functional & Integrative Genomics 23 (1), 15, 2023 | 2 | 2023 |
Genome-wide analysis of microRNA expression profile in roots and leaves of three wheat cultivars under water and drought conditions C Gómez-Martín, H Zhou, JM Medina, E Aparicio-Puerta, B Shi, ... Biomolecules 13 (3), 440, 2023 | 2 | 2023 |
geno5mC: A Database to Explore the Association between Genetic Variation (SNPs) and CpG Methylation in the Human Genome C Gómez-Martín, E Aparicio-Puerta, JM Medina, G Barturen, JL Oliver, ... Journal of Molecular Biology 433 (11), 166709, 2021 | 1 | 2021 |
Genome sequences of four Ixodes species expands understanding of tick evolution AC de Araujo, B Noel, A Bretaudeau, K Labadie, M Boudet, N Tadrent, ... bioRxiv, 2024.02. 29.581698, 2024 | | 2024 |