Dockground: a comprehensive data resource for modeling of protein complexes PJ Kundrotas, I Anishchenko, T Dauzhenka, I Kotthoff, D Mnevets, ... Protein Science 27 (1), 172-181, 2018 | 84 | 2018 |
Gaussian Accelerated Molecular Dynamics in OpenMM MM Copeland, HN Do, L Votapka, K Joshi, J Wang, RE Amaro, Y Miao The Journal of Physical Chemistry B 126 (31), 5810-5820, 2022 | 11 | 2022 |
Dockground resource for protein recognition studies KW Collins, MM Copeland, I Kotthoff, A Singh, PJ Kundrotas, IA Vakser Protein Science 31 (12), e4481, 2022 | 7 | 2022 |
Dockground tool for development and benchmarking of protein docking procedures PJ Kundrotas, I Kotthoff, SW Choi, MM Copeland, IA Vakser Protein Structure Prediction, 289-300, 2020 | 7 | 2020 |
GRAMM Web Server for Protein Docking A Singh, MM Copeland, PJ Kundrotas, IA Vakser Computational Drug Discovery and Design, 101-112, 2023 | 5 | 2023 |
GWYRE: A resource for Mapping Variants onto Experimental and Modeled Structures of Human Protein Complexes S Malladi, HR Powell, A David, SA Islam, MM Copeland, PJ Kundrotas, ... Journal of molecular biology 434 (11), 167608, 2022 | 4 | 2022 |
General features of transmembrane beta barrels from a large database D Montezano, R Bernstein, MM Copeland, JSG Slusky Proceedings of the National Academy of Sciences 120 (29), e2220762120, 2023 | 2 | 2023 |
MAHOMES II: A webserver for predicting if a metal binding site is enzymatic R Feehan, M Copeland, MW Franklin, JSG Slusky Protein Science 32 (4), e4626, 2023 | 1 | 2023 |
CAPRI-Q: The CAPRI resource evaluating the quality of predicted structures of protein complexes KW Collins, MM Copeland, G Brysbaert, SJ Wodak, AMJJ Bonvin, ... Journal of Molecular Biology, 168540, 2024 | | 2024 |
General features of transmembrane beta barrels from a large database J Slusky, D Montezano, R Bernstein, M Copeland Biophysical Journal 122 (3), 168a, 2023 | | 2023 |
Gramm: A webserver for free and template-based protein docking A Singh, MM Copeland, PJ Kundrotas, IA Vakser Biophysical Journal 122 (3), 47a, 2023 | | 2023 |