MCMICRO: A scalable, modular image-processing pipeline for multiplexed tissue imaging D Schapiro, A Sokolov, C Yapp, YA Chen, JL Muhlich, J Hess, ... Nature methods 19 (3), 311-315, 2022 | 127 | 2022 |
Novel multiparameter correlates of Coxiella burnetii infection and vaccination identified by longitudinal deep immune profiling PM Reeves, S Raju Paul, L Baeten, SE Korek, Y Yi, J Hess, D Sobell, ... Scientific Reports 10 (1), 13311, 2020 | 9 | 2020 |
MIAAIM: Multi-omics image integration and tissue state mapping using topological data analysis and cobordism learning JM Hess, I Ilieş, D Schapiro, JJ Iskra, WM Abdelmoula, MS Regan, ... bioRxiv, 2021.12. 20.472858, 2021 | 3 | 2021 |
Deep immune profiling of whole blood to identify early immune signatures that correlate to patient outcome after major trauma AE Mendoza, SR Paul, M El Hechi, L Naar, C Nederpelt, S Mikdad, ... Journal of Trauma and Acute Care Surgery 90 (6), 959-966, 2021 | 1 | 2021 |
Cytometry profiling of ex vivo recall responses to Coxiella burnetii in previously naturally exposed individuals reveals long-term changes in both adaptive and … S Raju Paul, A Scholzen, PM Reeves, R Shepard, JM Hess, RK Dzeng, ... Frontiers in Immunology 14, 1249581, 2023 | | 2023 |
B cell‐dependent subtypes and treatment‐based immune correlates to survival in stage 3 and 4 lung adenocarcinomas SR Paul, I Valiev, SE Korek, V Zyrin, D Shamsutdinova, O Gancharova, ... FASEB BioAdvances 5 (4), 156, 2023 | | 2023 |