Paul Havlak, Ph.D.
Paul Havlak, Ph.D.
Senior Bioinformatics Engineer, Driscoll's Inc.
Verified email at
Cited by
Cited by
Insights into social insects from the genome of the honeybee Apis mellifera
Honeybee Genome Sequencing Consortium
Nature 443 (7114), 931, 2006
Evolutionary and biomedical insights from the rhesus macaque genome
RA Gibbs, J Rogers, MG Katze, R Bumgarner, GM Weinstock, ER Mardis, ...
science 316 (5822), 222-234, 2007
The genome sequence of taurine cattle: a window to ruminant biology and evolution
CG Elsik, RL Tellam, KC Worley
Science 324 (5926), 522-528, 2009
The DNA sequence of the human X chromosome
MT Ross, DV Grafham, AJ Coffey, S Scherer, K McLay, D Muzny, ...
Nature 434 (7031), 325-337, 2005
The genome of the ctenophore Mnemiopsis leidyi and its implications for cell type evolution
JF Ryan, K Pang, CE Schnitzler, AD Nguyen, RT Moreland, DK Simmons, ...
Science 342 (6164), 2013
Insights into bilaterian evolution from three spiralian genomes
O Simakov, F Marletaz, SJ Cho, E Edsinger-Gonzales, P Havlak, ...
Nature 493 (7433), 526-531, 2012
Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution
S Richards, Y Liu, BR Bettencourt, P Hradecky, S Letovsky, R Nielsen, ...
Genome research 15 (1), 1-18, 2005
An implementation of interprocedural bounded regular section analysis
P Havlak, K Kennedy
IEEE Transactions on Parallel and Distributed Systems 2 (3), 350-360, 1991
The First Myriapod Genome Sequence Reveals Conservative Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima
AD Chipman, DEK Ferrier, C Brena, J Qu, DST Hughes, R Schröder, ...
PLoS biology 12 (11), e1002005, 2014
The Atlas genome assembly system
P Havlak, R Chen, KJ Durbin, A Egan, Y Ren, XZ Song, GM Weinstock, ...
Genome Research 14 (4), 721-732, 2004
Bos taurus genome assembly
Y Liu, X Qin, XZH Song, H Jiang, Y Shen, KJ Durbin, S Lien, MP Kent, ...
BMC genomics 10 (1), 1-11, 2009
Nesting of reducible and irreducible loops
P Havlak
ACM Transactions on Programming Languages and Systems (TOPLAS) 19 (4), 557-567, 1997
Genomic segmental polymorphisms in inbred mouse strains
J Li, T Jiang, JH Mao, A Balmain, L Peterson, C Harris, PH Rao, P Havlak, ...
Nature genetics 36 (9), 952-954, 2004
Joint assembly and genetic mapping of the Atlantic horseshoe crab genome reveals ancient whole genome duplication
CW Nossa, P Havlak, JX Yue, J Lv, KY Vincent, HJ Brockmann, ...
GigaScience 3 (1), 2047-217X-3-9, 2014
The finished DNA sequence of human chromosome 12
SE Scherer, DM Muzny, CJ Buhay, R Chen, A Cree, Y Ding, ...
Nature 440 (7082), 346-351, 2006
Construction of thinned gated single-assignment form
P Havlak
Languages and Compilers for Parallel Computing, 477-499, 1994
Interprocedural symbolic analysis
PH Havlak
Rice University, 1995
The DNA sequence, annotation and analysis of human chromosome 3
DM Muzny, SE Scherer, R Kaul, J Wang, J Yu, R Sudbrak, CJ Buhay, ...
Nature 440 (7088), 1194-1198, 2006
Whole Genome Sequencing of Mutation Accumulation Lines Reveals a Low Mutation Rate in the Social Amoeba Dictyostelium discoideum
G Saxer, P Havlak, SA Fox, MA Quance, S Gupta, Y Fofanov, ...
Public Library of Science 7 (10), e46759, 2012
Index array flattening through program transformation
R Das, P Havlak, J Saltz, K Kennedy
Proceedings of the 1995 ACM/IEEE conference on Supercomputing, 70, 1995
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