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Matthew T. Weirauch
Matthew T. Weirauch
Other namesMatt Weirauch, Matthew Weirauch
Verified email at cchmc.org
Title
Cited by
Cited by
Year
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ...
nature 447 (7146), 799-816, 2007
60152007
Predicting the sequence specificities of DNA-and RNA-binding proteins by deep learning
B Alipanahi, A Delong, MT Weirauch, BJ Frey
Nature biotechnology 33 (8), 831-838, 2015
29522015
The human transcription factors
SA Lambert, A Jolma, LF Campitelli, PK Das, Y Yin, M Albu, X Chen, ...
Cell 172 (4), 650-665, 2018
27292018
Genome sequence of the Brown Norway rat yields insights into mammalian evolution
University of Utah Weiss Robert B. 14 Dunn Diane M. 14, ...
Nature 428 (6982), 493-521, 2004
25202004
The genetic landscape of a cell
M Costanzo, A Baryshnikova, J Bellay, Y Kim, ED Spear, CS Sevier, ...
science 327 (5964), 425-431, 2010
24972010
Determination and inference of eukaryotic transcription factor sequence specificity
MT Weirauch, A Yang, M Albu, AG Cote, A Montenegro-Montero, P Drewe, ...
Cell 158 (6), 1431-1443, 2014
17022014
A compendium of RNA-binding motifs for decoding gene regulation
D Ray, H Kazan, KB Cook, MT Weirauch, HS Najafabadi, X Li, ...
Nature 499 (7457), 172-177, 2013
14992013
The UCSC genome browser database: update 2006
AS Hinrichs, D Karolchik, R Baertsch, GP Barber, G Bejerano, H Clawson, ...
Nucleic acids research 34 (suppl_1), D590-D598, 2006
13792006
Genetic associations with gestational duration and spontaneous preterm birth
G Zhang, B Feenstra, J Bacelis, X Liu, LM Muglia, J Juodakis, DE Miller, ...
New England Journal of Medicine 377 (12), 1156-1167, 2017
4202017
Temporal transcriptional response to ethylene gas drives growth hormone cross-regulation in Arabidopsis
KN Chang, S Zhong, MT Weirauch, G Hon, M Pelizzola, H Li, SC Huang, ...
elife 2, e00675, 2013
4012013
Evaluation of methods for modeling transcription factor sequence specificity
MT Weirauch, A Cote, R Norel, M Annala, Y Zhao, TR Riley, ...
Nature biotechnology 31 (2), 126-134, 2013
4002013
Transcription factors operate across disease loci, with EBNA2 implicated in autoimmunity
JB Harley, X Chen, M Pujato, D Miller, A Maddox, C Forney, ...
Nature genetics 50 (5), 699-707, 2018
3472018
C2H2 zinc finger proteins greatly expand the human regulatory lexicon
HS Najafabadi, S Mnaimneh, FW Schmitges, M Garton, KN Lam, A Yang, ...
Nature biotechnology 33 (5), 555-562, 2015
3442015
Genome-wide association analysis of eosinophilic esophagitis provides insight into the tissue specificity of this allergic disease
LC Kottyan, BP Davis, JD Sherrill, K Liu, M Rochman, K Kaufman, ...
Nature genetics 46 (8), 895-900, 2014
3012014
MultiPipMaker and supporting tools: Alignments and analysis of multiple genomic DNA sequences
S Schwartz, L Elnitski, M Li, M Weirauch, C Riemer, A Smit, NCS Program, ...
Nucleic acids research 31 (13), 3518-3524, 2003
2752003
Mapping and dynamics of regulatory DNA and transcription factor networks in A. thaliana
AM Sullivan, AA Arsovski, J Lempe, KL Bubb, MT Weirauch, PJ Sabo, ...
Cell reports 8 (6), 2015-2030, 2014
2652014
Structural basis for recognition of AT-rich DNA by unrelated xenogeneic silencing proteins
BRG Gordon, Y Li, A Cote, MT Weirauch, P Ding, TR Hughes, ...
Proceedings of the National Academy of Sciences 108 (26), 10690-10695, 2011
2462011
Amphioxus functional genomics and the origins of vertebrate gene regulation
F Marlétaz, PN Firbas, I Maeso, JJ Tena, O Bogdanovic, M Perry, ...
Nature 564 (7734), 64-70, 2018
2322018
A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae)
SD Schoville, YH Chen, MN Andersson, JB Benoit, A Bhandari, ...
Scientific reports 8 (1), 1931, 2018
2212018
Single-nucleus RNA-seq identifies transcriptional heterogeneity in multinucleated skeletal myofibers
MJ Petrany, CO Swoboda, C Sun, K Chetal, X Chen, MT Weirauch, ...
Nature communications 11 (1), 6374, 2020
2002020
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