| Transcription factors orchestrate dynamic interplay between genome topology and gene regulation during cell reprogramming R Stadhouders, E Vidal, F Serra, B Di Stefano, F Le Dily, J Quilez, ... Nature genetics 50 (2), 238-249, 2018 | 229 | 2018 |
| C/EBPα poises B cells for rapid reprogramming into induced pluripotent stem cells B Di Stefano, JL Sardina, C van Oevelen, S Collombet, EM Kallin, ... Nature 506 (7487), 235-239, 2014 | 210 | 2014 |
| RSAT 2018: regulatory sequence analysis tools 20th anniversary NTT Nguyen, B Contreras-Moreira, JA Castro-Mondragon, ... Nucleic acids research 46 (W1), W209-W214, 2018 | 149 | 2018 |
| Transcription factors drive Tet2-mediated enhancer demethylation to reprogram cell fate JL Sardina, S Collombet, TV Tian, A Gómez, B Di Stefano, C Berenguer, ... Cell stem cell 23 (5), 727-741. e9, 2018 | 139 | 2018 |
| SPEN integrates transcriptional and epigenetic control of X-inactivation F Dossin, I Pinheiro, JJ Żylicz, J Roensch, S Collombet, A Le Saux, ... Nature 578 (7795), 455-460, 2020 | 101 | 2020 |
| Logical modeling of lymphoid and myeloid cell specification and transdifferentiation S Collombet, C van Oevelen, JLS Ortega, W Abou-Jaoudé, B Di Stefano, ... Proceedings of the National Academy of Sciences 114 (23), 5792-5799, 2017 | 91 | 2017 |
| C/EBPα activates pre-existing and de novo macrophage enhancers during induced pre-B cell transdifferentiation and myelopoiesis C van Oevelen, S Collombet, G Vicent, M Hoogenkamp, C Lepoivre, ... Stem cell reports 5 (2), 232-247, 2015 | 85 | 2015 |
| C/EBPα creates elite cells for iPSC reprogramming by upregulating Klf4 and increasing the levels of Lsd1 and Brd4 B Di Stefano, S Collombet, JS Jakobsen, M Wierer, JL Sardina, A Lackner, ... Nature cell biology 18 (4), 371-381, 2016 | 84 | 2016 |
| Parental-to-embryo switch of chromosome organization in early embryogenesis S Collombet, N Ranisavljevic, T Nagano, C Varnai, T Shisode, W Leung, ... Nature 580 (7801), 142-146, 2020 | 62 | 2020 |
| Constitutively active SMAD2/3 are broad-scope potentiators of transcription-factor-mediated cellular reprogramming T Ruetz, U Pfisterer, B Di Stefano, J Ashmore, M Beniazza, TV Tian, ... Cell stem cell 21 (6), 791-805. e9, 2017 | 27 | 2017 |
| Dynamic reversal of random X-Chromosome inactivation during iPSC reprogramming A Janiszewski, I Talon, J Chappell, S Collombet, J Song, N De Geest, ... Genome research 29 (10), 1659-1672, 2019 | 23 | 2019 |
| ZNF143 protein is an important regulator of the myeloid transcription factor C/EBPα D Gonzalez, A Luyten, B Bartholdy, Q Zhou, M Kardosova, A Ebralidze, ... Journal of Biological Chemistry 292 (46), 18924-18936, 2017 | 18 | 2017 |
| Krox20 hindbrain regulation incorporates multiple modes of cooperation between cis-acting elements E Thierion, J Le Men, S Collombet, C Hernandez, F Coulpier, P Torbey, ... PLoS genetics 13 (7), e1006903, 2017 | 11 | 2017 |
| Cooperation, cis-interactions, versatility and evolutionary plasticity of multiple cis-acting elements underlie krox20 hindbrain regulation P Torbey, E Thierion, S Collombet, A de Cian, C Desmarquet-Trin-Dinh, ... PLoS genetics 14 (8), e1007581, 2018 | 10 | 2018 |
| A transcription factor pulse can prime chromatin for heritable transcriptional memory A Iberg-Badeaux, S Collombet, B Laurent, C van Oevelen, KK Chin, ... Molecular and cellular biology 37 (4), e00372-16, 2017 | 7 | 2017 |
| Time-resolved gene expression profiling during reprogramming of C/EBPα-pulsed B cells into iPS cells B Di Stefano, S Collombet, T Graf Scientific data 1 (1), 1-8, 2014 | 6 | 2014 |
| Gene regulation in time and space during X-chromosome inactivation A Loda, S Collombet, E Heard Nature Reviews Molecular Cell Biology, 1-19, 2022 | 5 | 2022 |
| RNA polymerase II depletion from the inactive X chromosome territory is not mediated by physical compartmentalization S Collombet, I Rall, C Dugast-Darzacq, A Heckert, A Halavatyi, A Le Saux, ... bioRxiv, 2021 | 5 | 2021 |
| Logical modeling of cell fate specification—Application to T cell commitment E Cacace, S Collombet, D Thieffry Current Topics in Developmental Biology 139, 205-238, 2020 | 2 | 2020 |
| Bioinformatic Analysis of Single-Cell Hi-C Data from Early Mouse Embryo S Collombet, YA Pérez-Rico, K Ancelin, N Servant, E Heard Epigenetic Reprogramming During Mouse Embryogenesis, 295-316, 2021 | 1 | 2021 |
Thomas GrafCenter for Genomic Regulation, CRGVerified email at crg.eu
