Md. Shamsuzzoha Bayzid
Md. Shamsuzzoha Bayzid
Department of Computer Science and Engineering, Bangladesh University of Engineering and Technology
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Whole-genome analyses resolve early branches in the tree of life of modern birds
ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ...
Science 346 (6215), 1320-1331, 2014
ASTRAL: genome-scale coalescent-based species tree estimation
S Mirarab, R Reaz, MS Bayzid, T Zimmermann, MS Swenson, T Warnow
Bioinformatics 30 (17), i541-i548, 2014
Evaluating summary methods for multilocus species tree estimation in the presence of incomplete lineage sorting
S Mirarab, MS Bayzid, T Warnow
Systematic Biology 65 (3), 366-380, 2016
Statistical binning enables an accurate coalescent-based estimation of the avian tree
S Mirarab, MS Bayzid, B Boussau, T Warnow
Science 346 (6215), 2014
Naive binning improves phylogenomic analyses
MS Bayzid, T Warnow
Bioinformatics 29 (18), 2277-2284, 2013
Weighted Statistical Binning: enabling statistically consistent genome-scale phylogenetic analyses
BBTW Md. Shamsuzzoha Bayzid, Siavash Mirarab
PLoS ONE 10 (6), 2015
Accurate phylogenetic tree reconstruction from quartets: A heuristic approach
R Reaz, MS Bayzid, MS Rahman
PloS one 9 (8), e104008, 2014
Discovering pairwise compatibility graphs
MN Yanhaona, MS Bayzid, MS Rahman
Discrete Mathematics, Algorithms and Applications 2 (04), 607-623, 2010
Disk covering methods improve phylogenomic analyses
MS Bayzid, T Hunt, T Warnow
BMC genomics 15 (6), 1-11, 2014
Estimating optimal species trees from incomplete gene trees under deep coalescence
MS Bayzid, T Warnow
Journal of Computational Biology 19 (6), 591-605, 2012
Inferring optimal species trees under gene duplication and loss
MS Bayzid, S Mirarab, T Warnow
Biocomputing 2013, 250-261, 2013
Comment on “Statistical binning enables an accurate coalescent-based estimation of the avian tree”
L Liu, SV Edwards
Science 350 (6257), 171-171, 2015
SAINT: self-attention augmented inception-inside-inception network improves protein secondary structure prediction
MR Uddin, S Mahbub, MS Rahman, MS Bayzid
Bioinformatics 36 (17), 4599-4608, 2020
Gene tree parsimony for incomplete gene trees: addressing true biological loss
MS Bayzid, T Warnow
Algorithms for Molecular Biology 13 (1), 1-12, 2018
STELAR: A statistically consistent coalescent-based species tree estimation method by maximizing triplet consistency
M Islam, K Sarker, T Das, R Reaz, MS Bayzid
BMC genomics 21 (1), 1-13, 2020
Hmec: A heuristic algorithm for individual haplotyping with minimum error correction
M Bayzid, M Alam, A Mueen, M Rahman
International Scholarly Research Notices 2013, 2013
Machine learning based imputation techniques for estimating phylogenetic trees from incomplete distance matrices
A Bhattacharjee, MS Bayzid
BMC genomics 21 (1), 1-14, 2020
Application of artificial neural network in social computing in the context of third world countries
MS Bayzid, A Iqbal, CS Hyder, MT Irfan
2008 International Conference on Electrical and Computer Engineering, 648-653, 2008
A'phylogeny-aware'multi-objective optimization approach for computing MSA
MA Nayeem, MS Bayzid, AH Rahman, R Shahriyar, MS Rahman
Proceedings of the Genetic and Evolutionary Computation Conference, 577-585, 2019
Gene tree parsimony for incomplete gene trees
M Bayzid, T Warnow
17th International Workshop on Algorithms in Bioinformatics (WABI 2017), 2017
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