An overview of the active gene annotation corpus and the BioNLP OST 2019 AGAC track tasks Y Wang, K Zhou, M Gachloo, J Xia Proceedings of The 5th workshop on BioNLP open shared tasks, 62-71, 2019 | 20 | 2019 |
A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition M Gachloo, Y Wang, J Xia Genomics & informatics 17 (2), 2019 | 17 | 2019 |
Guideline design of an active gene annotation corpus for the purpose of drug repurposing Y Wang, X Yao, K Zhou, X Qin, JD Kim, KB Cohen, J Xia 2018 11th International Congress on Image and Signal Processing, BioMedical …, 2018 | 13 | 2018 |
GOF/LOF knowledge inference with tensor decomposition in support of high order link discovery for gene, mutation and disease KY Zhou, YX Wang, S Zhang, M Gachloo, JD Kim, Q Luo, KB Cohen, ... Math Biosci Eng 16 (16), 1376-1391, 2019 | 11 | 2019 |
Bridging heterogeneous mutation data to enhance disease gene discovery K Zhou, Y Wang, K Bretonnel Cohen, JD Kim, X Ma, Z Shen, X Meng, ... Briefings in Bioinformatics 22 (5), bbab079, 2021 | 8 | 2021 |
HPO-Shuffle: an associated gene prioritization strategy and its application in drug repurposing for the treatment of canine epilepsy S Wang, X Meng, Y Wang, Y Liu, J Xia Bioscience Reports 39 (9), BSR20191247, 2019 | 8 | 2019 |
High-quality gene/disease embedding in a multi-relational heterogeneous graph after a joint matrix/tensor decomposition K Zhou, S Zhang, Y Wang, KB Cohen, JD Kim, Q Luo, X Yao, X Zhou, ... Journal of Biomedical Informatics 126, 103973, 2022 | 7 | 2022 |
An active gene annotation corpus and its application on anti-epilepsy drug discovery Y Wang, K Zhou, JD Kim, KB Cohen, M Gachloo, Y Ren, S Nie, X Qin, ... 2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2019 | 7 | 2019 |
CRF-LSTM text mining method unveiling the pharmacological mechanism of off-target side effect of anti-multiple myeloma drugs K Zhou, S Zhang, X Meng, Q Luo, Y Wang, K Ding, Y Feng, M Chen, ... Proceedings of the BioNLP 2018 workshop, 166-171, 2018 | 6 | 2018 |
Gene based message passing for drug repurposing Y Wang, Z Li, J Rao, Y Yang, Z Dai Iscience 26 (9), 2023 | 3 | 2023 |
LitCovid-AGAC: cellular and molecular level annotation data set based on COVID-19 S Ouyang, Y Wang, K Zhou, J Xia Genomics & Informatics 19 (3), 2021 | 3 | 2021 |
Trigger Words Detection by Integrating Attention Mechanism into Bi-LSTM Neural Network—A Case Study in PubMED-Wide Trigger Words Detection for Pancreatic Cancer K Zhou, X Yao, S Wang, JD Kim, KB Cohen, R Chen, Y Wang, J Xia Chinese Computational Linguistics and Natural Language Processing Based on …, 2018 | 2 | 2018 |