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Tian Zhang
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Dual proteome-scale networks reveal cell-specific remodeling of the human interactome
EL Huttlin, RJ Bruckner, J Navarrete-Perea, JR Cannon, K Baltier, ...
Cell 184 (11), 3022-3040. e28, 2021
5772021
A human-airway-on-a-chip for the rapid identification of candidate antiviral therapeutics and prophylactics
L Si, H Bai, M Rodas, W Cao, CY Oh, A Jiang, R Moller, D Hoagland, ...
Nature biomedical engineering 5 (8), 815-829, 2021
2542021
Antimicrobial peptaibols from Trichoderma pseudokoningii induce programmed cell death in plant fungal pathogens
M Shi, L Chen, XW Wang, T Zhang, PB Zhao, XY Song, CY Sun, XL Chen, ...
Microbiology 158 (1), 166-175, 2012
1702012
3D culture models with CRISPR screens reveal hyperactive NRF2 as a prerequisite for spheroid formation via regulation of proliferation and ferroptosis
N Takahashi, P Cho, LM Selfors, HJ Kuiken, R Kaul, T Fujiwara, IS Harris, ...
Molecular cell 80 (5), 828-844. e6, 2020
1212020
Time-resolved analysis of proteome dynamics by tandem mass tags and stable isotope labeling in cell culture (TMT-SILAC) hyperplexing
KA Welle, T Zhang, JR Hryhorenko, S Shen, J Qu, S Ghaemmaghami
Molecular & Cellular Proteomics 15 (12), 3551-3563, 2016
922016
Cdk1 controls global epigenetic landscape in embryonic stem cells
W Michowski, JM Chick, C Chu, A Kolodziejczyk, Y Wang, JM Suski, ...
Molecular cell 78 (3), 459-476. e13, 2020
912020
Global analysis of cellular protein flux quantifies the selectivity of basal autophagy
T Zhang, S Shen, J Qu, S Ghaemmaghami
Cell reports 14 (10), 2426-2439, 2016
882016
Calpain, Atg5 and Bak play important roles in the crosstalk between apoptosis and autophagy induced by influx of extracellular calcium
M Shi, T Zhang, L Sun, Y Luo, DH Liu, ST Xie, XY Song, GF Wang, ...
Apoptosis 18 (4), 435-451, 2013
782013
A multi-scale map of cell structure fusing protein images and interactions
Y Qin, EL Huttlin, CF Winsnes, ML Gosztyla, L Wacheul, MR Kelly, ...
Nature 600 (7889), 536-542, 2021
522021
CDC7-independent G1/S transition revealed by targeted protein degradation
JM Suski, N Ratnayeke, M Braun, T Zhang, V Strmiska, W Michowski, ...
Nature 605 (7909), 357-365, 2022
412022
Temporal proteomic profiling of SH-SY5Y differentiation with retinoic acid using FAIMS and real-time searching
T Zhang, SP Gygi, JA Paulo
Journal of proteome research 20 (1), 704-714, 2020
352020
Proteome-wide modulation of degradation dynamics in response to growth arrest
T Zhang, C Wolfe, A Pierle, KA Welle, JR Hryhorenko, S Ghaemmaghami
Proceedings of the National Academy of Sciences 114 (48), E10329-E10338, 2017
292017
Regulation of protein abundance in genetically diverse mouse populations
GR Keele, T Zhang, DT Pham, M Vincent, TA Bell, P Hock, GD Shaw, ...
Cell Genomics 1 (1), 100003, 2021
272021
Targeting the cyclin-dependent kinase 5 in metastatic melanoma
S Sharma, T Zhang, W Michowski, VW Rebecca, M Xiao, R Ferretti, ...
Proceedings of the National Academy of Sciences 117 (14), 8001-8012, 2020
272020
Mechanism of p38 MAPK–induced EGFR endocytosis and its crosstalk with ligand-induced pathways
M Perez Verdaguer, T Zhang, JA Paulo, S Gygi, SC Watkins, H Sakurai, ...
Journal of Cell Biology 220 (7), e202102005, 2021
222021
Kinetics of precursor labeling in stable isotope labeling in cell cultures (SILAC) experiments
T Zhang, JC Price, E Nouri-Nigjeh, J Li, MK Hellerstein, J Qu, ...
Analytical chemistry 86 (22), 11334-11341, 2014
182014
Sample multiplexing-based targeted pathway proteomics with real-time analytics reveals the impact of genetic variation on protein expression
Q Yu, X Liu, MP Keller, J Navarrete-Perea, T Zhang, S Fu, LP Vaites, ...
Nature Communications 14 (1), 555, 2023
162023
Self-assembling short immunostimulatory duplex RNAs with broad-spectrum antiviral activity
L Si, H Bai, CY Oh, A Jiang, F Hong, T Zhang, Y Ye, TX Jordan, J Logue, ...
Molecular Therapy-Nucleic Acids 29, 923-940, 2022
162022
Time-resolved proximity labeling of protein networks associated with ligand-activated EGFR
MP Verdaguer, T Zhang, S Surve, JA Paulo, C Wallace, SC Watkins, ...
Cell reports 39 (11), 2022
142022
Architecture of the outbred brown fat proteome defines regulators of metabolic physiology
H Xiao, LHM Bozi, Y Sun, CL Riley, VM Philip, M Chen, J Li, T Zhang, ...
Cell 185 (24), 4654-4673. e28, 2022
122022
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