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Daniel Griffith
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The SARS-CoV-2 nucleocapsid protein is dynamic, disordered, and phase separates with RNA
J Cubuk, JJ Alston, JJ Incicco, S Singh, MD Stuchell-Brereton, MD Ward, ...
Nature communications 12 (1), 1-17, 2021
4512021
Metapredict: a fast, accurate, and easy-to-use predictor of consensus disorder and structure
RJ Emenecker, D Griffith, AS Holehouse
Biophysical journal 120 (20), 4312-4319, 2021
1042021
Clustering of Aromatic Residues in Prion-like Domains Can Tune the Formation, State, and Organization of Biomolecular Condensates
AS Holehouse, GM Ginell, D Griffith, E Böke
Biochemistry, 2021
632021
Imbalance of tyrosine by modulating TyrA arogenate dehydrogenases impacts growth and development of Arabidopsis thaliana
MVV de Oliveira, X Jin, X Chen, D Griffith, S Batchu, HA Maeda
The Plant Journal 97 (5), 901-922, 2019
262019
Direct prediction of intrinsically disordered protein conformational properties from sequence
JM Lotthammer, GM Ginell, D Griffith, R Emenecker, AS Holehouse
Biophysical Journal 123 (3), 43a, 2024
172024
CAID prediction portal: a comprehensive service for predicting intrinsic disorder and binding regions in proteins
A Del Conte, A Bouhraoua, M Mehdiabadi, D Clementel, AM Monzon, ...
Nucleic Acids Research 51 (W1), W62-W69, 2023
142023
Metapredict V2: An update to metapredict, a fast, accurate, and easy-to-use predictor of consensus disorder and structure
RJ Emenecker, D Griffith, AS Holehouse
BioRxiv, 2022.06. 06.494887, 2022
142022
PARROT is a flexible recurrent neural network framework for analysis of large protein datasets
D Griffith, AS Holehouse
Elife 10, e70576, 2021
142021
Poly (A)-binding protein is an ataxin-2 chaperone that regulates biomolecular condensates
S Boeynaems, Y Dorone, Y Zhuang, V Shabardina, G Huang, A Marian, ...
Molecular cell 83 (12), 2020-2034. e6, 2023
112023
The SARS-CoV-2 nucleocapsid protein is dynamic, disordered, and phase separates with RNA. Nat Commun 2021, 12: 1936
J Cubuk, J Alston, J Incicco, S Singh, M Stuchell-Brereton, M Ward, ...
7
The formation of a fuzzy complex in the negative arm regulates the robustness of the circadian clock
MS Jankowski, D Griffith, DG Shastry, JF Pelham, GM Ginell, J Thomas, ...
bioRxiv, 2022.01. 04.474980, 2022
52022
The SARS-CoV-2 nucleocapsid protein is dynamic, disordered, and phase separates with RNA. Nat Commun 12 (1): 1936
J Cubuk, JJ Alston, JJ Incicco, S Singh, MD Stuchell-Brereton, MD Ward, ...
52021
High throughput measurements of direct activation domain-coactivator interactions
N DelRosso, P Suzuki, D Griffith, AS Holehouse, L Bintu, P Fordyce
Biophysical Journal 122 (3), 68a, 2023
2023
A fuzzy complex in the negative arm regulates circadian clock robustness.
J Hurley, M Jankowski, D Griffith, D Shastry, J Pelham, G Ginell, J Thomas, ...
2022
LOCATE reveals electrostatic “islands” and “hotspots” are important for a disordered clock protein's interactions to regulate clock robustness
MS Jankowski, D Griffith, DG Shastry, JF Pelham, J Thomas, P Karande, ...
Biophysical Journal 121 (3), 196a-197a, 2022
2022
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