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Kazim Yalcin Arga
Kazim Yalcin Arga
Professor of Bioengineering @ Marmara University
Verified email at marmara.edu.tr - Homepage
Title
Cited by
Cited by
Year
A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology
MJ Herrgċrd, N Swainston, P Dobson, WB Dunn, KY Arga, M Arvas, ...
Nature biotechnology 26 (10), 1155-1160, 2008
6542008
The role of protein interaction networks in systems biomedicine
T Sevimoglu, KY Arga
Computational and structural biotechnology journal 11 (18), 22-27, 2014
1352014
Metabolic biomarkers and neurodegeneration: a pathway enrichment analysis of Alzheimer's disease, Parkinson's disease, and amyotrophic lateral sclerosis
M Kori, B Aydın, S Unal, KY Arga, D Kazan
Omics: a journal of integrative biology 20 (11), 645-661, 2016
1042016
Potential biomarkers and therapeutic targets in cervical cancer: Insights from the meta-analysis of transcriptomics data within network biomedicine perspective
M Kori, K Yalcin Arga
PloS one 13 (7), e0200717, 2018
842018
Effective stimulating factors for microbial levan production by Halomonas smyrnensis AAD6T
HK Sarilmiser, O Ates, G Ozdemir, KY Arga, ET Oner
Journal of bioscience and bioengineering 119 (4), 455-463, 2015
842015
Network-based approach to identify molecular signatures and therapeutic agents in Alzheimer’s disease
MR Rahman, T Islam, B Turanli, T Zaman, HM Faruquee, MM Rahman, ...
Computational biology and chemistry 78, 431-439, 2019
802019
Tissue-specific molecular biomarker signatures of type 2 diabetes: an integrative analysis of transcriptomics and protein–protein interaction data
B Calimlioglu, K Karagoz, T Sevimoglu, E Kilic, E Gov, KY Arga
Omics: a journal of integrative biology 19 (9), 563-573, 2015
752015
Triple negative breast cancer: a multi-omics network discovery strategy for candidate targets and driving pathways
K Karagoz, R Sinha, KY Arga
Omics: a journal of integrative biology 19 (2), 115-130, 2015
752015
Differential co-expression analysis reveals a novel prognostic gene module in ovarian cancer
E Gov, KY Arga
Scientific reports 7 (1), 1-10, 2017
712017
Drug repositioning for effective prostate cancer treatment
B Turanli, M Grĝtli, J Boren, J Nielsen, M Uhlen, KY Arga, A Mardinoglu
Frontiers in physiology, 500, 2018
672018
Genome-scale reconstruction of metabolic network for a halophilic extremophile, Chromohalobacter salexigens DSM 3043
Ö Ates, ET Oner, KY Arga
BMC systems biology 5 (1), 1-13, 2011
672011
Molecular signatures of ovarian diseases: Insights from network medicine perspective
M Kori, E Gov, KY Arga
Systems biology in reproductive medicine 62 (4), 266-282, 2016
552016
Identification of prognostic biomarker signatures and candidate drugs in colorectal cancer: insights from systems biology analysis
MR Rahman, T Islam, E Gov, B Turanli, G Gulfidan, M Shahjaman, ...
Medicina 55 (1), 20, 2019
532019
Discovery of therapeutic agents for prostate cancer using genome-scale metabolic modeling and drug repositioning
B Turanli, C Zhang, W Kim, R Benfeitas, M Uhlen, KY Arga, A Mardinoglu
EBioMedicine 42, 386-396, 2019
502019
Drug targeting and biomarkers in head and neck cancers: insights from systems biology analyses
T Islam, R Rahman, E Gov, B Turanli, G Gulfidan, A Haque, KY Arga, ...
Omics: a journal of integrative biology 22 (6), 422-436, 2018
502018
Multiomics analysis of tumor microenvironment reveals Gata2 and miRNA-124-3p as potential novel biomarkers in ovarian cancer
E Gov, M Kori, KY Arga
Omics: a journal of integrative biology 21 (10), 603-615, 2017
502017
Systems biology based drug repositioning for development of cancer therapy
B Turanli, O Altay, J Borén, H Turkez, J Nielsen, M Uhlen, KY Arga, ...
Seminars in cancer biology 68, 47-58, 2021
472021
A network-based cancer drug discovery: from integrated multi-omics approaches to precision medicine
B Turanli, K Karagoz, G Gulfidan, R Sinha, A Mardinoglu, KY Arga
Current pharmaceutical design 24 (32), 3778-3790, 2018
402018
The stimulatory effect of mannitol on levan biosynthesis: Lessons from metabolic systems analysis of Halomonas smyrnensis AAD6T
O Ates, KY Arga, ET Oner
Biotechnology progress 29 (6), 1386-1397, 2013
402013
Genomic analysis reveals the biotechnological and industrial potential of levan producing halophilic extremophile, Halomonas smyrnensis AAD6T
E Diken, T Ozer, M Arikan, Z Emrence, ET Oner, D Ustek, KY Arga
SpringerPlus 4 (1), 1-11, 2015
352015
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Articles 1–20