Eftychios A. Pnevmatikakis
Eftychios A. Pnevmatikakis
Center for Computational Mathematics, Flatiron Institute, Simons Foundation
Verified email at flatironinstitute.org
Title
Cited by
Cited by
Year
Simultaneous denoising, deconvolution, and demixing of calcium imaging data
EA Pnevmatikakis, D Soudry, Y Gao, TA Machado, J Merel, D Pfau, ...
Neuron 89 (2), 285-299, 2016
7192016
NoRMCorre: An online algorithm for piecewise rigid motion correction of calcium imaging data
EA Pnevmatikakis, A Giovannucci
Journal of Neuroscience Methods 291, 83-94, 2017
3592017
Efficient and accurate extraction of in vivo calcium signals from microendoscopic video data
P Zhou, SL Resendez, J Rodriguez-Romaguera, JC Jimenez, SQ Neufeld, ...
Elife 7, e28728, 2018
3012018
CaImAn an open source tool for scalable calcium imaging data analysis
A Giovannucci, J Friedrich, P Gunn, J Kalfon, BL Brown, SA Koay, ...
Elife 8, e38173, 2019
2732019
A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters
KD Piatkevich, EE Jung, C Straub, C Linghu, D Park, HJ Suk, ...
Nature chemical biology 14 (4), 352-360, 2018
2142018
Simultaneous multi-plane imaging of neural circuits
W Yang, JK Miller, L Carrillo-Reid, E Pnevmatikakis, L Paninski, R Yuste, ...
Neuron 89 (2), 269-284, 2016
1982016
Cerebellar granule cells acquire a widespread predictive feedback signal during motor learning
A Giovannucci, A Badura, B Deverett, F Najafi, TD Pereira, Z Gao, I Ozden, ...
Nature neuroscience 20 (5), 727-734, 2017
1262017
Population-level representation of a temporal sequence underlying song production in the zebra finch
MA Picardo, J Merel, KA Katlowitz, D Vallentin, DE Okobi, SE Benezra, ...
Neuron 90 (4), 866-876, 2016
1042016
MULTI-INPUT MULTI-OUTPUT TIME ENCODING AND DECODING MACHINES
AA Lazar, EA Pnevmatikakis
US Patent 20,120,039,399, 2012
852012
Spatiotemporal receptive fields of barrel cortex revealed by reverse correlation of synaptic input
A Ramirez, EA Pnevmatikakis, J Merel, L Paninski, KD Miller, RM Bruno
Nature neuroscience 17 (6), 866-875, 2014
772014
Video time encoding machines
AA Lazar, EA Pnevmatikakis
IEEE Transactions on Neural Networks 22 (3), 461-473, 2011
752011
Bayesian spike inference from calcium imaging data
EA Pnevmatikakis, J Merel, A Pakman, L Paninski
Asilomar Conference on Signals, Systems and Computers, 2013, 2013
602013
Robust learning of low dimensional dynamics from large neural ensembles
D Pfau, EA Pnevmatikakis, L Paninski
Advances in Neural Information Processing Systems, 2391-2399, 2013
602013
Faithful representation of stimuli with a population of integrate-and-fire neurons
AA Lazar, EA Pnevmatikakis
Neural computation 20 (11), 2715-2744, 2008
542008
Excitatory and inhibitory subnetworks are equally selective during decision-making and emerge simultaneously during learning
F Najafi, GF Elsayed, R Cao, E Pnevmatikakis, PE Latham, ...
Neuron 105 (1), 165-179. e8, 2020
52*2020
Primacy of flexor locomotor pattern revealed by ancestral reversion of motor neuron identity
TA Machado, E Pnevmatikakis, L Paninski, TM Jessell, A Miri
Cell 162 (2), 338-350, 2015
502015
Sparse nonnegative deconvolution for compressive calcium imaging: algorithms and phase transitions
EA Pnevmatikakis, L Paninski
Advances in Neural Information Processing Systems, 2013, 2013
492013
An inpainting system for automatic image structure-texture restoration with text removal
EA Pnevmatikakis, P Maragos
2008 15th IEEE International Conference on Image Processing, 2616-2619, 2008
472008
Onacid: Online analysis of calcium imaging data in real time
A Giovannucci, J Friedrich, M Kaufman, A Churchland, D Chklovskii, ...
Biorxiv, 193383, 2017
432017
Reinforcement learning recruits somata and apical dendrites across layers of primary sensory cortex
CO Lacefield, EA Pnevmatikakis, L Paninski, RM Bruno
Cell reports 26 (8), 2000-2008. e2, 2019
392019
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Articles 1–20