|Frequent mutations of chromatin remodeling genes in transitional cell carcinoma of the bladder|
Y Gui, G Guo, Y Huang, X Hu, A Tang, S Gao, R Wu, C Chen, X Li, L Zhou, ...
Nature genetics 43 (9), 875-878, 2011
|Whole-genome and whole-exome sequencing of bladder cancer identifies frequent alterations in genes involved in sister chromatid cohesion and segregation|
G Guo, X Sun, C Chen, S Wu, P Huang, Z Li, M Dean, Y Huang, W Jia, ...
Nature genetics 45 (12), 1459-1463, 2013
|Frequent mutations of genes encoding ubiquitin-mediated proteolysis pathway components in clear cell renal cell carcinoma|
G Guo, Y Gui, S Gao, A Tang, X Hu, Y Huang, W Jia, Z Li, M He, L Sun, ...
Nature genetics 44 (1), 17-19, 2012
|Genome-wide profiling of HPV integration in cervical cancer identifies clustered genomic hot spots and a potential microhomology-mediated integration mechanism|
Z Hu, D Zhu, W Wang, W Li, W Jia, X Zeng, W Ding, L Yu, X Wang, ...
Nature genetics 47 (2), 158, 2015
|SOAPfuse: an algorithm for identifying fusion transcripts from paired-end RNA-Seq data|
W Jia, K Qiu, M He, P Song, Q Zhou, F Zhou, Y Yu, D Zhu, ML Nickerson, ...
Genome biology 14 (2), R12, 2013
|Whole-genome sequencing uncovers the genetic basis of chronic mountain sickness in Andean highlanders|
D Zhou, N Udpa, R Ronen, T Stobdan, J Liang, O Appenzeller, HW Zhao, ...
The American Journal of Human Genetics 93 (3), 452-462, 2013
|Whole genome sequencing of Ethiopian highlanders reveals conserved hypoxia tolerance genes|
N Udpa, R Ronen, D Zhou, J Liang, T Stobdan, O Appenzeller, Y Yin, ...
Genome biology 15 (2), 1-14, 2014
|RNA over-editing of BLCAP contributes to hepatocarcinogenesis identified by whole-genome and transcriptome sequencing|
X Hu, S Wan, Y Ou, B Zhou, J Zhu, X Yi, Y Guan, W Jia, X Liu, Q Wang, ...
Cancer letters 357 (2), 510-519, 2015
|SMAP: a streamlined methylation analysis pipeline for bisulfite sequencing|
S Gao, D Zou, L Mao, Q Zhou, W Jia, Y Huang, S Zhao, G Chen, S Wu, ...
Gigascience 4 (1), s13742-015-0070-9, 2015
|Method of detecting fused transcripts and system thereof|
W Jia, K Qiu, G Guo, M He, J Wang, J Wang, H Yang
US Patent App. 14/369,566, 2014
|Viral integration drives multifocal HCC during the occult HBV infection|
XP Chen, X Long, W Jia, HJ Wu, J Zhao, HF Liang, A Laurence, J Zhu, ...
Journal of Experimental & Clinical Cancer Research 38 (1), 1-11, 2019
|Identification of a novel EXT1 mutation in patients with hereditary multiple exostosis by exome sequencing|
H Liu, S Wu, LI Duan, W Zhu, S Zhang, X Hu, W Jia, G Yang, C Liu, W Li, ...
Oncology reports 33 (2), 547-552, 2015
|Oviz-Bio: a web-based platform for interactive cancer genomics data visualization|
W Jia, H Li, S Li, L Chen, SC Li
Nucleic Acids Research, 2020
|Functional Organization of the Maternal and Paternal Human 4D Nucleome|
S Lindsly, W Jia, H Chen, S Liu, S Ronquist, C Chen, X Wen, G Dotson, ...
|Conjugate graph resolves the complex structures at the virus integration loci with NGS data|
W Jia, C Xu, SC Li
|Genome architecture and transcription data reveal allelic bias during the cell cycle|
SM Lindsly, W Jia, H Chen, S Ronquist, C Chen, X Wen, SC Li, M Wicha, ...
|CovProfile: profiling the viral genome and gene expressions of SARS-COV-2|
Y Yu, Z Li, Y Li, L Yu, W Jia, Y Jiang, F Ye, SC Li
|SpecHap: a fast haplotyping method based on spectral graph theory|
Y Yu, L Chen, B Tan, W Jia, S Li
BioRxiv, 870972, 2019
|LandScape: a web application for interactive genomic summary visualization|
W Jia, H Li, S Li, S Li
bioRxiv, 866087, 2019
|Placing segments on parallel arcs|
YK Ng, W Jia, SC Li
International Workshop on Combinatorial Algorithms, 298-310, 2018