| Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres AH Paterson, JF Wendel, H Gundlach, H Guo, J Jenkins, D Jin, ... Nature 492 (7429), 423, 2012 | 678 | 2012 |
| iRSpot-PseDNC: identify recombination spots with pseudo dinucleotide composition W Chen, PM Feng, H Lin, KC Chou Nucleic acids research 41 (6), e68-e68, 2013 | 484 | 2013 |
| iPro54-PseKNC: a sequence-based predictor for identifying sigma-54 promoters in prokaryote with pseudo k-tuple nucleotide composition H Lin, EZ Deng, H Ding, W Chen, KC Chou Nucleic acids research 42 (21), 12961-12972, 2014 | 366 | 2014 |
| iNuc-PseKNC: a sequence-based predictor for predicting nucleosome positioning in genomes with pseudo k-tuple nucleotide composition SH Guo, EZ Deng, LQ Xu, H Ding, H Lin, W Chen, KC Chou Bioinformatics 30 (11), 1522-1529, 2014 | 303 | 2014 |
| PseKNC: a flexible web server for generating pseudo K-tuple nucleotide composition W Chen, TY Lei, DC Jin, H Lin, KC Chou Analytical biochemistry 456, 53-60, 2014 | 272 | 2014 |
| Pseudo nucleotide composition or PseKNC: an effective formulation for analyzing genomic sequences W Chen, H Lin, KC Chou Molecular BioSystems 11 (10), 2620-2634, 2015 | 213 | 2015 |
| iHSP-PseRAAAC: Identifying the heat shock protein families using pseudo reduced amino acid alphabet composition PM Feng, W Chen, H Lin, KC Chou Analytical Biochemistry 442 (1), 118-125, 2013 | 212 | 2013 |
| iRNA-Methyl: Identifying N6-methyladenosine sites using pseudo nucleotide composition W Chen, P Feng, H Ding, H Lin, KC Chou Analytical biochemistry 490, 26-33, 2015 | 207 | 2015 |
| iTIS-PseTNC: a sequence-based predictor for identifying translation initiation site in human genes using pseudo trinucleotide composition W Chen, PM Feng, EZ Deng, H Lin, KC Chou Analytical biochemistry 462, 76-83, 2014 | 207 | 2014 |
| iNuc-PhysChem: a sequence-based predictor for identifying nucleosomes via physicochemical properties W Chen, H Lin, PM Feng, C Ding, YC Zuo, KC Chou PloS one 7 (10), e47843, 2012 | 195 | 2012 |
| iACP: a sequence-based tool for identifying anticancer peptides W Chen, H Ding, P Feng, H Lin, KC Chou Oncotarget 7 (13), 16895, 2016 | 191 | 2016 |
| iCTX-Type: A sequence-based predictor for identifying the types of conotoxins in targeting ion channels H Ding, EZ Deng, LF Yuan, L Liu, H Lin, W Chen, KC Chou BioMed research international 2014, 2014 | 191 | 2014 |
| iSS-PseDNC: identifying splicing sites using pseudo dinucleotide composition W Chen, PM Feng, H Lin, KC Chou BioMed research international 2014, 2014 | 182 | 2014 |
| iRNA-PseU: Identifying RNA pseudouridine sites W Chen, H Tang, J Ye, H Lin, KC Chou Molecular Therapy-Nucleic Acids 5, e332, 2016 | 179 | 2016 |
| iRNA-PseColl: identifying the occurrence sites of different RNA modifications by incorporating collective effects of nucleotides into PseKNC P Feng, H Ding, H Yang, W Chen, H Lin, KC Chou Molecular Therapy-Nucleic Acids 7, 155-163, 2017 | 170 | 2017 |
| iRNA-AI: identifying the adenosine to inosine editing sites in RNA sequences W Chen, P Feng, H Yang, H Ding, H Lin, KC Chou Oncotarget 8 (3), 4208, 2017 | 152 | 2017 |
| PseKNC-General: a cross-platform package for generating various modes of pseudo nucleotide compositions W Chen, X Zhang, J Brooker, H Lin, L Zhang, KC Chou Bioinformatics 31 (1), 119-120, 2014 | 141 | 2014 |
| iOri-Human: identify human origin of replication by incorporating dinucleotide physicochemical properties into pseudo nucleotide composition CJ Zhang, H Tang, WC Li, H Lin, W Chen, KC Chou Oncotarget 7 (43), 69783, 2016 | 130 | 2016 |
| iDNA6mA-PseKNC: Identifying DNA N6-methyladenosine sites by incorporating nucleotide physicochemical properties into PseKNC P Feng, H Yang, H Ding, H Lin, W Chen, KC Chou Genomics 111 (1), 96-102, 2019 | 126 | 2019 |
| iRSpot-Pse6NC: Identifying recombination spots in Saccharomyces cerevisiae by incorporating hexamer composition into general PseKNC H Yang, WR Qiu, G Liu, FB Guo, W Chen, KC Chou, H Lin International journal of biological sciences 14 (8), 883, 2018 | 98 | 2018 |