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Farid Rashidi Mehrabadi
Farid Rashidi Mehrabadi
Data Scientist and Cancer Researcher, NIH
Verified email at nih.gov - Homepage
Title
Cited by
Cited by
Year
Clonal evolution and heterogeneity of osimertinib acquired resistance mechanisms in EGFR mutant lung cancer
N Roper, AL Brown, JS Wei, S Pack, C Trindade, C Kim, O Restifo, S Gao, ...
Cell reports medicine 1 (1), 2020
1022020
PhISCS: a combinatorial approach for subperfect tumor phylogeny reconstruction via integrative use of single-cell and bulk sequencing data
S Malikic*, FR Mehrabadi*, S Ciccolella*, MK Rahman, C Ricketts, ...
Genome research 29 (11), 1860-1877, 2019
802019
PhISCS-BnB: a fast branch and bound algorithm for the perfect tumor phylogeny reconstruction problem
E Sadeqi Azer*, F Rashidi Mehrabadi*, S Malikić, XC Li, O Bartok, ...
Bioinformatics 36 (Supplement_1), i169-i176, 2020
192020
A study on prediction of user's tendency toward purchases in websites based on behavior models
EG Boroujerdi, S Mehri, SS Garmaroudi, M Pezeshki, FR Mehrabadi, ...
2014 6th Conference on Information and Knowledge Technology (IKT), 61-66, 2014
122014
A transcriptionally distinct subpopulation of healthy acinar cells exhibit features of pancreatic progenitors and PDAC
V Gopalan, A Singh, F Rashidi Mehrabadi, L Wang, E Ruppin, HE Arda, ...
Cancer research 81 (15), 3958-3970, 2021
112021
Profiles of expressed mutations in single cells reveal subclonal expansion patterns and therapeutic impact of intratumor heterogeneity
FR Mehrabadi, KL Marie, E Pérez-Guijarro, S Malikić, ES Azer, HH Yang, ...
bioRxiv, 2021.03. 26.437185, 2021
82021
Clonal Evolution and Heterogeneity of Osimertinib Acquired Resistance Mechanisms in EGFR Mutant Lung Cancer. Cell Rep Med 1 (2020)
N Roper, AL Brown, JS Wei, S Pack, C Trindade, C Kim, O Restifo, S Gao, ...
62020
Studying the history of tumor evolution from single-cell sequencing data by exploring the space of binary matrices
S Malikić*, FR Mehrabadi*, ES Azer, MH Ebrahimabadi, SC Sahinalp
Journal of Computational Biology 28 (9), 857-879, 2021
52021
Fast intratumor heterogeneity inference from single-cell sequencing data
C Kızılkale*, F Rashidi Mehrabadi*, E Sadeqi Azer, E Pérez-Guijarro, ...
Nature Computational Science, 1-7, 2022
22022
Single-cell methylation sequencing data reveal succinct metastatic migration histories and tumor progression models
Y Liu, XC Li, FR Mehrabadi, AA Schäffer, D Pratt, DR Crawford, S Malikić, ...
Genome Research 33 (7), 1089-1100, 2023
12023
Epigenomic tumor evolution modeling with single-cell methylation data profiling
XC Li, Y Liu, F Rashidi, S Malikic, SM Mount, E Ruppin, K Aldape, ...
Cancer Research 81 (13), 2021
12021
Structural variant dynamics in melanoma: Unraveling tumor heterogeneity and evolution
X Cui, AG Keskus, FR Mehrabadi, S Malikic, M Kolmogorov, CP Day, ...
Cancer Research 84 (6_Supplement), 6924-6924, 2024
2024
Genome-wide profiling of transcription factor activity in primary liver cancer using single-cell ATAC sequencing
AJ Craig, MAD Silveira, L Ma, M Revsine, L Wang, S Heinrich, Z Rae, ...
Cell reports 42 (11), 2023
2023
Single-cell methylation sequencing data reveals succinct metastatic migration histories and tumor progression models
XC Li, Y Liu, FR Mehrabadi, AA Schäffer, D Pratt, DR Crawford, S Malikić, ...
Cancer Research 83 (7_Supplement), 127-127, 2023
2023
Melanoma clonal subline analysis uncovers heterogeneity-driven immunotherapy resistance mechanisms
C Gruen, HH Yang, A Sassano, E Wu, V Gopalan, KL Marie, A Castro, ...
bioRxiv, 2023.04. 03.535074, 2023
2023
Scalable Tumor Phylogeny Inference and Validation from Single-Cell RNA or DNA Data
FR Mehrabadi
Indiana University, 2022
2022
MSE20 Benchmark: The inference of tumor evolutionary history from single-cell DNA sequencing data
FR Mehrabadi, S Malikic, SC Sahinalp
MaxSAT Evaluation 2020, 60, 0
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Articles 1–17