| iProX: an integrated proteome resource J Ma, T Chen, S Wu, C Yang, M Bai, K Shu, K Li, G Zhang, Z Jin, F He, ... Nucleic acids research 47 (D1), D1211-D1217, 2019 | 991 | 2019 |
| Pathological features of COVID-19-associated lung injury: a preliminary proteomics report based on clinical samples L Leng, R Cao, J Ma, D Mou, Y Zhu, W Li, L Lv, D Gao, S Zhang, F Gong, ... Signal Transduction and Targeted Therapy 5 (1), 240, 2020 | 135 | 2020 |
| Prognostic evaluation of Nanog, Oct4, Sox2, PCNA, Ki67 and E-cadherin expression in gastric cancer N Li, W Deng, J Ma, B Wei, K Guo, W Shen, Y Zhang, S Luo Medical oncology 32, 1-9, 2015 | 123 | 2015 |
| A fast workflow for identification and quantification of proteomes C Ding, J Jiang, J Wei, W Liu, W Zhang, M Liu, T Fu, T Lu, L Song, W Ying, ... Molecular & cellular proteomics 12 (8), 2370-2380, 2013 | 115 | 2013 |
| Systematic analyses of the transcriptome, translatome, and proteome provide a global view and potential strategy for the C-HPP C Chang, L Li, C Zhang, S Wu, K Guo, J Zi, Z Chen, J Jiang, J Ma, Q Yu, ... Journal of proteome research 13 (1), 38-49, 2014 | 65 | 2014 |
| Quantitative proteome analysis of HCC cell lines with different metastatic potentials by SILAC N Chen, W Sun, X Deng, Y Hao, X Chen, B Xing, W Jia, J Ma, H Wei, ... Proteomics 8 (23‐24), 5108-5118, 2008 | 55 | 2008 |
| LFQ uant: a label‐free fast quantitative analysis tool for high‐resolution LC‐MS/MS proteomics data W Zhang, J Zhang, C Xu, N Li, H Liu, J Ma, Y Zhu, H Xie Proteomics 12 (23-24), 3475-3484, 2012 | 44 | 2012 |
| Characterization of the liver tissue interstitial fluid (TIF) proteome indicates potential for application in liver disease biomarker discovery W Sun, J Ma, S Wu, D Yang, Y Yan, K Liu, J Wang, L Sun, N Chen, H Wei, ... Journal of proteome research 9 (2), 1020-1031, 2010 | 42 | 2010 |
| Bayesian nonparametric model for the validation of peptide identification in shotgun proteomics J Zhang, J Ma, L Dou, S Wu, X Qian, H Xie, Y Zhu, F He Molecular & Cellular Proteomics 8 (3), 547-557, 2009 | 42 | 2009 |
| P ep D istiller: A quality control tool to improve the sensitivity and accuracy of peptide identifications in shotgun proteomics N Li, S Wu, C Zhang, C Chang, J Zhang, J Ma, L Li, X Qian, P Xu, Y Zhu, ... Proteomics 12 (11), 1720-1725, 2012 | 38 | 2012 |
| MoGCN: a multi-omics integration method based on graph convolutional network for cancer subtype analysis X Li, J Ma, L Leng, M Han, M Li, F He, Y Zhu Frontiers in Genetics 13, 806842, 2022 | 37 | 2022 |
| In-depth method assessments of differentially expressed protein detection for shotgun proteomics data with missing values J Wang, L Li, T Chen, J Ma, Y Zhu, J Zhuang, C Chang Scientific reports 7 (1), 3367, 2017 | 36 | 2017 |
| A proteomics strategy for the identification of FAT10-modified sites by mass spectrometry L Leng, C Xu, C Wei, J Zhang, B Liu, J Ma, N Li, W Qin, W Zhang, ... Journal of proteome research 13 (1), 268-276, 2014 | 31 | 2014 |
| SILVER: an efficient tool for stable isotope labeling LC-MS data quantitative analysis with quality control methods C Chang, J Zhang, M Han, J Ma, W Zhang, S Wu, K Liu, H Xie, F He, ... Bioinformatics 30 (4), 586-587, 2014 | 30 | 2014 |
| Establishment of human pluripotent stem cell‐derived skin organoids enabled pathophysiological model of SARS‐CoV‐2 infection J Ma, J Liu, D Gao, X Li, Q Zhang, L Lv, Y Wang, J Li, Y Zhu, Z Wu, H Hu, ... Advanced Science 9 (7), 2104192, 2022 | 29 | 2022 |
| Spatially resolved proteomic map shows that extracellular matrix regulates epidermal growth J Li, J Ma, Q Zhang, H Gong, D Gao, Y Wang, B Li, X Li, H Zheng, Z Wu, ... Nature Communications 13 (1), 4012, 2022 | 28 | 2022 |
| CAPER: a chromosome-assembled human proteome browsER F Guo, D Wang, Z Liu, L Lu, W Zhang, H Sun, H Zhang, J Ma, S Wu, N Li, ... Journal of Proteome Research 12 (1), 179-186, 2013 | 28 | 2013 |
| Computational identification of rare codons of Escherichia coli based on codon pairs preference X Wu, S Wu, D Li, J Zhang, L Hou, J Ma, W Liu, D Ren, Y Zhu, F He Bmc Bioinformatics 11, 1-8, 2010 | 28 | 2010 |
| Using the entrapment sequence method as a standard to evaluate key steps of proteomics data analysis process X Feng, L Li, J Zhang, Y Zhu, C Chang, K Shu, J Ma BMC genomics 18, 1-9, 2017 | 27 | 2017 |
| Antimicrobial Resistance and Molecular Characterization of Gene Cassettes from Class 1 Integrons in Pseudomonas aeruginosa Strains M Liu, J Ma, W Jia, W Li Microbial Drug Resistance 26 (6), 670-676, 2020 | 26 | 2020 |
