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Tim Kahlke
Tim Kahlke
Head of Bioinformatics, Blue Mountains Analytics
Verified email at bluemountainsanalytics.com.au
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Cited by
Year
Emerging technologies in algal biotechnology: toward the establishment of a sustainable, algae-based bioeconomy
M Fabris, RM Abbriano, M Pernice, DL Sutherland, AS Commault, ...
Frontiers in plant science 11, 279, 2020
1432020
Genetic correlation between amyotrophic lateral sclerosis and schizophrenia
RL McLaughlin, D Schijven, W Van Rheenen, KR Van Eijk, M O’Brien, ...
Nature communications 8 (1), 1-12, 2017
1082017
DNA sequencing as a tool to monitor marine ecological status
KD Goodwin, LR Thompson, B Duarte, T Kahlke, AR Thompson, ...
Frontiers in Marine Science 4, 107, 2017
852017
EMMA 2–a MAGE-compliant system for the collaborative analysis and integration of microarray data
M Dondrup, SP Albaum, T Griebel, K Henckel, S Jünemann, T Kahlke, ...
BMC bioinformatics 10 (1), 1-14, 2009
802009
Defining the core microbiome of the symbiotic dinoflagellate, Symbiodinium
CA Lawson, JB Raina, T Kahlke, JR Seymour, DJ Suggett
Environmental Microbiology Reports 10 (1), 7-11, 2018
742018
Symbiodiniaceae‐bacteria interactions: rethinking metabolite exchange in reef‐building corals as multi‐partner metabolic networks
JL Matthews, JB Raina, T Kahlke, JR Seymour, MJH van Oppen, ...
Environmental Microbiology 22 (5), 1675-1687, 2020
632020
Whole-genome sequencing reveals clonal expansion of multiresistant Staphylococcus haemolyticus in European hospitals
JP Cavanagh, E Hjerde, MTG Holden, T Kahlke, C Klingenberg, ...
Journal of Antimicrobial Chemotherapy 69 (11), 2920-2927, 2014
582014
Regional and Microenvironmental Scale Characterization of the Zostera muelleri Seagrass Microbiome
V Hurtado-McCormick, T Kahlke, K Petrou, T Jeffries, PJ Ralph, ...
Frontiers in microbiology 10, 1011, 2019
542019
Coral microbiome diversity reflects mass coral bleaching susceptibility during the 2016 El Niño heat wave
SG Gardner, EF Camp, DJ Smith, T Kahlke, EO Osman, G Gendron, ...
Ecology and evolution 9 (3), 938-956, 2019
502019
BASTA–Taxonomic classification of sequences and sequence bins using Last Common Ancestor estimations
T Kahlke, PJ Ralph
Methods in Ecology and Evolution, 2018
452018
Systematic, continental scale temporal monitoring of marine pelagic microbiota by the Australian Marine Microbial Biodiversity Initiative
MV Brown, J Van De Kamp, M Ostrowski, JR Seymour, T Ingleton, ...
Scientific data 5 (1), 1-10, 2018
422018
The Microbiome of the Cosmopolitan Diatom Leptocylindrus Reveals Significant Spatial and Temporal Variability
PA Ajani, T Kahlke, N Siboni, R Carney, SA Murray, JR Seymour
Frontiers in microbiology 9, 2758, 2018
392018
Variability in the composition of Pacific oyster microbiomes across oyster families exhibiting different levels of susceptibility to OsHV-1 μvar disease
WL King, N Siboni, NLR Williams, T Kahlke, KV Nguyen, C Jenkins, ...
Frontiers in microbiology 10, 473, 2019
372019
Revealing changes in the microbiome of Symbiodiniaceae under thermal stress
EF Camp, T Kahlke, MR Nitschke, D Varkey, NL Fisher, L Fujise, S Goyen, ...
Environmental microbiology 22 (4), 1294-1309, 2020
312020
Perspectives for glyco-engineering of recombinant biopharmaceuticals from microalgae
L Barolo, RM Abbriano, AS Commault, J George, T Kahlke, M Fabris, ...
Cells 9 (3), 633, 2020
312020
Unique core genomes of the bacterial family vibrionaceae: insights into niche adaptation and speciation
T Kahlke, A Goesmann, E Hjerde, NP Willassen, P Haugen
BMC genomics 13 (1), 1-12, 2012
312012
Unlocking the phylogenetic diversity, primary habitats, and abundances of free‐living Symbiodiniaceae on a coral reef
L Fujise, DJ Suggett, M Stat, T Kahlke, M Bunce, SG Gardner, S Goyen, ...
Molecular ecology 30 (1), 343-360, 2021
272021
Bioluminescence
T Kahlke, KDL Umbers
Current Biology 26 (8), R313-R314, 2016
252016
Meta-pipe-pipeline annotation, analysis and visualization of marine metagenomic sequence data
EM Robertsen, T Kahlke, IA Raknes, E Pedersen, EK Semb, M Ernstsen, ...
arXiv preprint arXiv:1604.04103, 2016
252016
Genome sequencing as a new window into the microbial community of membrane bioreactors–A critical review
LN Nguyen, AS Commault, T Kahlke, PJ Ralph, GU Semblante, ...
Science of the Total Environment 704, 135279, 2020
242020
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