| Round trip: an automated pipeline for experimental design, execution, and analysis D Bryce, RP Goldman, M DeHaven, J Beal, B Bartley, TT Nguyen, ... ACS Synthetic Biology 11 (2), 608-622, 2022 | 10 | 2022 |
| Prediction of whole-cell transcriptional response with machine learning M Eslami, AE Borujeni, H Eramian, M Weston, G Zheng, J Urrutia, ... Bioinformatics 38 (2), 404-409, 2022 | 9 | 2022 |
| Robustness and reproducibility of simple and complex synthetic logic circuit designs using a DBTL loop B Cummins, J Vrana, RC Moseley, H Eramian, A Deckard, ... Synthetic Biology 8 (1), ysad005, 2023 | 7 | 2023 |
| Building an Open Representation for Biological Protocols B Bartley, J Beal, M Rogers, D Bryce, RP Goldman, B Keller, P Lee, ... ACM Journal on Emerging Technologies in Computing Systems 19 (3), 1-21, 2023 | 6 | 2023 |
| Intent parser: A tool for codification and sharing of experimental design T Nguyen, N Walczak, D Sumorok, M Weston, J Beal ACS Synthetic Biology 11 (1), 502-507, 2021 | 5 | 2021 |
| Phenotype-based threat assessment J Yang, M Eslami, YP Chen, M Das, D Zhang, S Chen, AJ Roberts, ... Proceedings of the National Academy of Sciences 119 (14), e2112886119, 2022 | 4 | 2022 |
| Highly-automated, high-throughput replication of yeast-based logic circuit design assessments RP Goldman, R Moseley, N Roehner, B Cummins, JD Vrana, KJ Clowers, ... Synthetic Biology 7 (1), ysac018, 2022 | 4 | 2022 |
| Intent parser: a tool for codifying experiment design T Nguyen, N Walczak, J Beal, D Sumorok, M Weston 12th International Workshop on Bio-Design Automation (IWBDA)(August 2020), 2-3, 2020 | 3 | 2020 |
| Computational prediction of synthetic circuit function across growth conditions B Cummins, RC Moseley, A Deckard, M Weston, G Zheng, D Bryce, ... bioRxiv, 2022.06. 13.495701, 2022 | 2 | 2022 |
| Data representation in the DARPA SD2 program N Roehner, J Beal, B Bartley, R Markeloff, T Mitchell, T Nguyen, ... BioRxiv, 2021.09. 17.460644, 2021 | 1 | 2021 |
| Neural network based integration of assays to assess pathogenic potential M Eslami, YP Chen, AC Nicholson, M Weston, M Bell, JR McQuiston, ... Scientific Reports 13 (1), 6021, 2023 | | 2023 |
