| Metagenomic and metabolomic analyses reveal distinct stage-specific phenotypes of the gut microbiota in colorectal cancer S Yachida, S Mizutani, H Shiroma, S Shiba, T Nakajima, T Sakamoto, ... Nature medicine 25 (6), 968-976, 2019 | 891 | 2019 |
| Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer J Wirbel, PT Pyl, E Kartal, K Zych, A Kashani, A Milanese, JS Fleck, ... Nature medicine 25 (4), 679-689, 2019 | 855 | 2019 |
| Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ... Nature medicine 25 (4), 667-678, 2019 | 667 | 2019 |
| Influence of gastrectomy for gastric cancer treatment on faecal microbiome and metabolome profiles PP Erawijantari, S Mizutani, H Shiroma, S Shiba, T Nakajima, T Sakamoto, ... Gut 69 (8), 1404-1415, 2020 | 96 | 2020 |
| Identification of Faecalibacterium prausnitzii strains for gut microbiome-based intervention in Alzheimer’s-type dementia A Ueda, S Shinkai, H Shiroma, Y Taniguchi, S Tsuchida, T Kariya, ... Cell Reports Medicine 2 (9), 2021 | 60 | 2021 |
| Leveraging explainable AI for gut microbiome-based colorectal cancer classification R Rynazal, K Fujisawa, H Shiroma, F Salim, S Mizutani, S Shiba, ... Genome Biology 24 (1), 21, 2023 | 13 | 2023 |
| Author Correction: Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ... Nature medicine 25 (12), 1948-1948, 2019 | 5 | 2019 |
| Surgical Treatment for Colorectal Cancer Partially Restores Gut Microbiome and Metabolome Traits H Shiroma, S Shiba, PP Erawijantari, H Takamaru, M Yamada, ... Msystems 7 (2), e00018-22, 2022 | 3 | 2022 |
| Gut microbial composition of elderly women born in the Japanese longevity village Ogimi H Morita, M Ichishima, I Tada, H Shiroma, M Miyagi, T Nakamura, ... Bioscience of Microbiota, Food and Health 40 (1), 75-79, 2021 | 3 | 2021 |
| QNetDiff: a quantitative measurement of network rewiring S Nose, H Shiroma, T Yamada, Y Uno BMC bioinformatics 25 (1), 118, 2024 | | 2024 |
| Enteropathway: the metabolic pathway database for the human gut microbiota H Shiroma, Y Darzi, E Terajima, Z Nakagawa, H Tsuchikura, N Tsukuda, ... bioRxiv, 2023.06. 28.546710, 2023 | | 2023 |
| Influence of gastrectomy for gastric cancer treatment on fecal microbiome and metabolome profiles T Yamada, P Erawijantari, S Mizutani, H Shiroma CANCER SCIENCE 113, 707-707, 2022 | | 2022 |
| Metagenomic and metabolomic analyses reveal stage specific phenotypes of the gut microbiota in colorectal cancer T Yamada, S Mizutani, S Yachida, H Shiroma, S Shiba CANCER SCIENCE 112, 167-167, 2021 | | 2021 |
| Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation (vol 25, pg 667, 2019) AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ... NATURE PUBLISHING GROUP, 2019 | | 2019 |
| Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer S Yachida, AY Voigt, A Palleja, R Ponnudurai, S Sunagawa, LP Coelho, ... | | 2019 |
