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Rui Li
Rui Li
Verified email at umassmed.edu
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Cited by
Cited by
Year
Whole transcriptome analysis with sequencing: methods, challenges and potential solutions
Z Jiang, X Zhou, R Li, JJ Michal, S Zhang, MV Dodson, Z Zhang, ...
Cellular and molecular life sciences 72, 3425-3439, 2015
1992015
Selenium detoxification is required for cancer-cell survival
AE Carlisle, N Lee, AN Matthew-Onabanjo, ME Spears, SJ Park, ...
Nature metabolism 2 (7), 603-611, 2020
1112020
An improved zebrafish transcriptome annotation for sensitive and comprehensive detection of cell type-specific genes
ND Lawson, R Li, M Shin, A Grosse, O Yukselen, OA Stone, A Kucukural, ...
Elife 9, e55792, 2020
762020
UPRmt scales mitochondrial network expansion with protein synthesis via mitochondrial import in Caenorhabditis elegans
T Shpilka, YG Du, Q Yang, A Melber, N Uma Naresh, J Lavelle, S Kim, ...
Nature communications 12 (1), 479, 2021
632021
Consequences of aneuploidy in human fibroblasts with trisomy 21
S Hwang, P Cavaliere, R Li, LJ Zhu, N Dephoure, EM Torres
Proceedings of the National Academy of Sciences 118 (6), e2014723118, 2021
502021
Genomic characterization of endothelial enhancers reveals a multifunctional role for NR2F2 in regulation of arteriovenous gene expression
S Sissaoui, J Yu, A Yan, R Li, O Yukselen, A Kucukural, LJ Zhu, ...
Circulation research 126 (7), 875-888, 2020
412020
LONP-1 and ATFS-1 sustain deleterious heteroplasmy by promoting mtDNA replication in dysfunctional mitochondria
Q Yang, P Liu, NS Anderson, T Shpilka, YG Du, NU Naresh, R Li, LJ Zhu, ...
Nature cell biology 24 (2), 181-193, 2022
392022
foxc1 is required for embryonic head vascular smooth muscle differentiation in zebrafish
TR Whitesell, PW Chrystal, JR Ryu, N Munsie, A Grosse, CR French, ...
Developmental biology 453 (1), 34-47, 2019
372019
Accurate profiling of gene expression and alternative polyadenylation with whole transcriptome termini site sequencing (WTTS-Seq)
X Zhou, R Li, JJ Michal, XL Wu, Z Liu, H Zhao, Y Xia, W Du, MR Wildung, ...
Genetics 203 (2), 683-697, 2016
352016
SLC7A11, a component of cysteine/glutamate transporter, is a novel biomarker for the diagnosis and prognosis in laryngeal squamous cell carcinoma
Z Ma, H Zhang, M Lian, C Yue, G Dong, Y Jin, R Li, H Wan, R Wang, ...
Oncology reports 38 (5), 3019-3029, 2017
332017
Genome wide screening of candidate genes for improving piglet birth weight using high and low estimated breeding value populations
L Zhang, X Zhou, JJ Michal, B Ding, R Li, Z Jiang
International journal of biological sciences 10 (3), 236, 2014
332014
OneStopRNAseq: a web application for comprehensive and efficient analyses of RNA-Seq data
R Li, K Hu, H Liu, MR Green, LJ Zhu
Genes 11 (10), 1165, 2020
302020
The landscape of accessible chromatin in quiescent cardiac fibroblasts and cardiac fibroblasts activated after myocardial infarction
C Li, J Sun, Q Liu, S Dodlapati, H Ming, L Wang, Y Li, R Li, Z Jiang, ...
Epigenetics 17 (9), 1020-1039, 2022
152022
O-linked α2, 3 sialylation defines stem cell populations in breast cancer
MR Walker, HL Goel, D Mukhopadhyay, P Chhoy, ER Karner, JL Clark, ...
Science Advances 8 (1), eabj9513, 2022
152022
Genome-wide analysis and functional characterization of the polyadenylation site in pigs using RNAseq data
H Wang, R Li, X Zhou, L Xue, X Xu, B Liu
Scientific Reports 6 (1), 36388, 2016
132016
Therapeutic blocking of VEGF binding to neuropilin-2 diminishes PD-L1 expression to activate antitumor immunity in prostate cancer
M Wang, CA Wisniewski, C Xiong, P Chhoy, HL Goel, A Kumar, LJ Zhu, ...
Science Translational Medicine 15 (694), eade5855, 2023
112023
A brown fat-enriched adipokine Adissp controls adipose thermogenesis and glucose homeostasis
Q Chen, L Huang, D Pan, K Hu, R Li, RH Friedline, JK Kim, LJ Zhu, ...
Nature Communications 13 (1), 7633, 2022
102022
Impaired mitochondrial oxidative metabolism in skeletal progenitor cells leads to musculoskeletal disintegration
C Lin, Q Yang, D Guo, J Xie, YS Yang, S Chaugule, N DeSouza, WT Oh, ...
Nature Communications 13 (1), 6869, 2022
102022
The chromatin-binding domain of Ki-67 together with p53 protects human chromosomes from mitotic damage
O Garwain, X Sun, DR Iyer, R Li, LJ Zhu, PD Kaufman
Proceedings of the National Academy of Sciences 118 (32), e2021998118, 2021
92021
De novo sphingolipid biosynthesis necessitates detoxification in cancer cells
ME Spears, N Lee, S Hwang, SJ Park, AE Carlisle, R Li, MB Doshi, ...
Cell reports 40 (13), 2022
82022
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Articles 1–20