| Integrated genomic analyses of ovarian carcinoma Cancer Genome Atlas Research Network Nature 474 (7353), 609, 2011 | 7036 | 2011 |
| An integrated genomic analysis of human glioblastoma multiforme DW Parsons, S Jones, X Zhang, JCH Lin, RJ Leary, P Angenendt, ... science 321 (5897), 1807-1812, 2008 | 6992 | 2008 |
| Core signaling pathways in human pancreatic cancers revealed by global genomic analyses S Jones, X Zhang, DW Parsons, JCH Lin, RJ Leary, P Angenendt, ... science 321 (5897), 1801-1806, 2008 | 4715 | 2008 |
| The genomic landscapes of human breast and colorectal cancers LD Wood, DW Parsons, S Jones, J Lin, T Sjoblom, RJ Leary, D Shen, ... Science 318 (5853), 1108-1113, 2007 | 3797 | 2007 |
| Comprehensive characterization of cancer driver genes and mutations MH Bailey, C Tokheim, E Porta-Pardo, S Sengupta, D Bertrand, ... Cell 173 (2), 371-385. e18, 2018 | 2293 | 2018 |
| Accumulation of driver and passenger mutations during tumor progression I Bozic, T Antal, H Ohtsuki, H Carter, D Kim, S Chen, R Karchin, ... Proceedings of the National Academy of Sciences 107 (43), 18545-18550, 2010 | 958 | 2010 |
| Evolution of neoantigen landscape during immune checkpoint blockade in non–small cell lung cancer V Anagnostou, KN Smith, PM Forde, N Niknafs, R Bhattacharya, J White, ... Cancer discovery 7 (3), 264-276, 2017 | 875 | 2017 |
| modbase, a database of annotated comparative protein structure models and associated resources U Pieper, N Eswar, BM Webb, D Eramian, L Kelly, DT Barkan, H Carter, ... Nucleic acids research 37 (suppl_1), D347-D354, 2009 | 854 | 2009 |
| The genetic landscape of the childhood cancer medulloblastoma DW Parsons, M Li, X Zhang, S Jones, RJ Leary, JCH Lin, SM Boca, ... science 331 (6016), 435-439, 2011 | 811 | 2011 |
| High grade serous ovarian carcinomas originate in the fallopian tube SI Labidi-Galy, E Papp, D Hallberg, N Niknafs, V Adleff, M Noe, ... Nature communications 8 (1), 1093, 2017 | 726 | 2017 |
| Exome sequencing identifies frequent inactivating mutations in BAP1, ARID1A and PBRM1 in intrahepatic cholangiocarcinomas Y Jiao, TM Pawlik, RA Anders, FM Selaru, MM Streppel, DJ Lucas, ... Nature genetics 45 (12), 1470-1473, 2013 | 709 | 2013 |
| Defining the disease liability of variants in the cystic fibrosis transmembrane conductance regulator gene PR Sosnay, KR Siklosi, F Van Goor, K Kaniecki, H Yu, N Sharma, ... Nature genetics 45 (10), 1160-1167, 2013 | 708 | 2013 |
| Whole-exome sequencing of neoplastic cysts of the pancreas reveals recurrent mutations in components of ubiquitin-dependent pathways J Wu, Y Jiao, M Dal Molin, A Maitra, RF De Wilde, LD Wood, JR Eshleman, ... Proceedings of the National Academy of Sciences 108 (52), 21188-21193, 2011 | 677 | 2011 |
| Identifying Mendelian disease genes with the variant effect scoring tool H Carter, C Douville, PD Stenson, DN Cooper, R Karchin BMC genomics 14, 1-16, 2013 | 571 | 2013 |
| Cancer-specific high-throughput annotation of somatic mutations: computational prediction of driver missense mutations H Carter, S Chen, L Isik, S Tyekucheva, VE Velculescu, KW Kinzler, ... Cancer research 69 (16), 6660-6667, 2009 | 555 | 2009 |
| The genomic landscape of response to EGFR blockade in colorectal cancer A Bertotti, E Papp, S Jones, V Adleff, V Anagnostou, B Lupo, M Sausen, ... Nature 526 (7572), 263-267, 2015 | 482 | 2015 |
| A combination of molecular markers and clinical features improve the classification of pancreatic cysts S Springer, Y Wang, M Dal Molin, DL Masica, Y Jiao, I Kinde, A Blackford, ... Gastroenterology 149 (6), 1501-1510, 2015 | 457 | 2015 |
| Evaluating the evaluation of cancer driver genes CJ Tokheim, N Papadopoulos, KW Kinzler, B Vogelstein, R Karchin Proceedings of the National Academy of Sciences 113 (50), 14330-14335, 2016 | 384 | 2016 |
| Classifying G-protein coupled receptors with support vector machines R Karchin, K Karplus, D Haussler Bioinformatics 18 (1), 147-159, 2002 | 374 | 2002 |
| Combining local‐structure, fold‐recognition, and new fold methods for protein structure prediction K Karplus, R Karchin, J Draper, J Casper, Y Mandel‐Gutfreund, ... Proteins: Structure, Function, and Bioinformatics 53 (S6), 491-496, 2003 | 364 | 2003 |
Noushin NiknafsResearch Associate, Johns Hopkins UniversityVerified email at jhu.edu
