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Ziyuan Chen
Ziyuan Chen
Postdoc, UC Berkeley
Verified email at berkeley.edu
Title
Cited by
Cited by
Year
Polyphosphate drives bacterial heterochromatin formation
F Beaufay, HM Amemiya, J Guan, J Basalla, BA Meinen, Z Chen, R Mitra, ...
Science Advances 7 (52), eabk0233, 2021
362021
Hypotonic stress promotes ATP release, reactive oxygen species production and cell proliferation via TRPV4 activation in rheumatoid arthritis rat synovial fibroblasts
F Hu, Z Hui, W Wei, J Yang, Z Chen, B Guo, F Xing, X Zhang, L Pan, J Xu
Biochemical and biophysical research communications 486 (1), 108-115, 2017
282017
Dynamic exchange of two essential DNA polymerases during replication and after fork arrest
Y Li, Z Chen, LA Matthews, LA Simmons, JS Biteen
Biophysical journal 116 (4), 684-693, 2019
232019
NOBIAS: Analyzing anomalous diffusion in single-molecule tracks with nonparametric Bayesian inference
Z Chen, L Geffroy, J Biteen
Front. Bioinform. 1, 2021.742073, 2021
222021
HP1 oligomerization compensates for low-affinity H3K9me recognition and provides a tunable mechanism for heterochromatin-specific localization
S Biswas, Z Chen, JD Karslake, A Farhat, A Ames, G Raiymbek, ...
Science advances 8 (27), eabk0793, 2022
15*2022
Spatiotemporal characteristics of intercellular calcium wave communication in micropatterned assemblies of single cells
F Xing, P Zhang, P Jiang, Z Chen, J Yang, F Hu, I Drevenšek-Olenik, ...
ACS applied materials & interfaces 10 (3), 2937-2945, 2018
102018
DNA Methylation and RNA-DNA Hybrids Regulate the Single-Molecule Localization of a DNA Methyltransferase on the Bacterial Nucleoid
NL Fernandez, Z Chen, DEH Fuller, LA van Gijtenbeek, TM Nye, ...
MBio 14 (1), e03185-22, 2023
52023
H3K9 methylation enhances HP1-associated epigenetic silencing complex assembly and suppresses off-chromatin binding
Z Chen, M Seman, A Farhat, Y Fyodorova, S Biswas, A Levashkevich, ...
BioRxiv, 2023.03. 08.531771, 2023
32023
Super-resolution imaging of DNA replisome dynamics in live Bacillus subtilis
Y Li, JW Schroeder, Y Liao, Z Chen, LA Simmons, JS Biteen
Biophysical Journal 114 (3), 539a, 2018
12018
The condensation of HP1α/Swi6 imparts nuclear stiffness
JF Williams, IV Surovtsev, SM Schreiner, Z Chen, G Raiymbek, H Nguyen, ...
Cell Reports 43 (7), 114373, 2024
2024
Super-resolution imaging and single-molecule tracking of RNA-DNA hybrid processing proteins in Bacillus subtilis
DJ Foust, Z Chen, JR Cresti, FC Lowder, LA Simmons, JS Biteen
Biophysical Journal 123 (3), 78a, 2024
2024
Epigenetic memory is governed by an effector recruitment specificity toggle in Heterochromatin Protein 1
A Ames, M Seman, A Larkin, G Raiymbek, Z Chen, A Levashkevich, B Kim, ...
Biorxiv, 2023.11. 28.569027, 2023
2023
Single-molecule dynamics of ribonuclease H enzymes in Bacillus subtilis
J Ashbrook, Z Chen, J Cresti, LA Simmons, J Biteen
Biophysical Journal 122 (3), 354a, 2023
2023
Modeling heterochromatin dynamics in S. pombe across diverse timescales
AM Farhat, S Biswas, Z Chen, A Larkin, K Ragunathan, J Biteen, ...
Biophysical journal 122 (3), 497a, 2023
2023
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