| Predicting sepsis severity at first clinical presentation: The role of endotypes and mechanistic signatures A Baghela, OM Pena, AH Lee, B Baquir, R Falsafi, A An, SW Farmer, ... EBioMedicine 75, 2022 | 77 | 2022 |
| An overview of biological and computational methods for designing mechanism-informed anti-biofilm agents AY An, KYG Choi, AS Baghela, REW Hancock Frontiers in Microbiology 12, 640787, 2021 | 33 | 2021 |
| Systems biology approaches to understanding the human immune system BK Dhillon, M Smith, A Baghela, AHY Lee, REW Hancock Frontiers in Immunology 11, 542199, 2020 | 28 | 2020 |
| The stringent stress response controls proteases and global regulators under optimal growth conditions in Pseudomonas aeruginosa D Pletzer, TM Blimkie, H Wolfmeier, Y Li, A Baghela, AHY Lee, R Falsafi, ... MSystems 5 (4), 10.1128/msystems. 00495-20, 2020 | 25 | 2020 |
| Predicting severity in COVID-19 disease using sepsis blood gene expression signatures A Baghela, A An, P Zhang, E Acton, J Gauthier, E Brunet-Ratnasingham, ... Scientific Reports 13 (1), 1247, 2023 | 23 | 2023 |
| NtrBC regulates invasiveness and virulence of Pseudomonas aeruginosa during high-density infection MA Alford, A Baghela, ATY Yeung, D Pletzer, REW Hancock Frontiers in microbiology 11, 533374, 2020 | 22 | 2020 |
| Gene expression profiling: Identification of novel pathways and potential biomarkers in severe acute pancreatitis M Nesvaderani, BK Dhillon, T Chew, B Tang, A Baghela, REW Hancock, ... Journal of the American College of Surgeons 234 (5), 803-815, 2022 | 18 | 2022 |
| Predicting sepsis severity at first clinical presentation: The role of endotypes and mechanistic signatures. EBioMedicine. 2022; 75: 103776 A Baghela, OM Pena, AH Lee, B Baquir, R Falsafi, A An, SW Farmer, ... | 7 | 2021 |
| Severe COVID-19 and non-COVID-19 severe sepsis converge transcriptionally after a week in the intensive care unit, indicating common disease mechanisms AY An, A Baghela, P Zhang, R Falsafi, AH Lee, U Trahtemberg, AJ Baker, ... Frontiers in Immunology 14, 1167917, 2023 | 5 | 2023 |
| Facilitating systems-level analyses of all-cause and Covid-mediated sepsis through SeptiSearch, a manually-curated compendium of dysregulated gene sets AS Baghela, J Tam, TM Blimkie, BK Dhillon, REW Hancock Frontiers in Immunology 14, 1135859, 2023 | 3 | 2023 |
| The stringent stress response controls proteases and global regulators under optimal growth conditions in Pseudomonas aeruginosa. mSystems 5: e00495-20 D Pletzer, TM Blimkie, H Wolfmeier, Y Li, A Baghela, AHY Lee, R Falsafi, ... | 3 | 2020 |
| Hackathon-driven tutorial development BM Grande, A Baghela, A Cavalla, F Privé, P Zhang, Y Zhen F1000Research 7, 1974, 2018 | 2 | 2018 |
| Gene Expression Profiling in Pediatric Appendicitis BK Dhillon, S Kortbeek, A Baghela, M Brindle, DA Martin, CN Jenne, ... JAMA pediatrics, 2024 | 1 | 2024 |
| Persistence is key: unresolved immune dysfunction is lethal in both COVID-19 and non-COVID-19 sepsis AY An, A Baghela, P Zhang, R Falsafi, AH Lee, U Trahtemberg, AJ Baker, ... Frontiers in Immunology 14, 1254873, 2023 | 1 | 2023 |
| Post-COVID symptoms are associated with endotypes reflecting poor inflammatory and hemostatic modulation AY An, A Baghela, PGY Zhang, TM Blimkie, J Gauthier, DE Kaufmann, ... Frontiers in Immunology 14, 1243689, 2023 | 1 | 2023 |
| Dynamic gene expression analysis reveals distinct severity phases of immune and cellular dysregulation in COVID-19 (preprint) A An, A Baghela, P Zhang, TM Blimkie, J Gauthier, DE Kaufmann, E Acton, ... | | 2023 |
| Dynamic gene expression analysis reveals distinct severity phases of immune and cellular dysregulation in COVID-19 A An, A Baghela, P Zhang, TM Blimkie, J Gauthier, DE Kaufmann, E Acton, ... bioRxiv, 2023.11. 04.565404, 2023 | | 2023 |
| Identifying predictive gene expression signatures of sepsis severity A Baghela University of British Columbia, 2022 | | 2022 |
