Adil Mardinoglu

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Mathias UhlénScience for Life Laboratory, KTH, StockholmVerified email at scilifelab.se
Jens NielsenProfessor in Systems Biology, Chalmers University of Technology, SwedenVerified email at chalmers.se
Cheng ZhangScience for Life LaboratoryVerified email at scilifelab.se
Jan BorénInstitute of Medicine, Dept of Molecular and Clinical Medicine, University of Gothenburg, SwedenVerified email at wlab.gu.se
Hasan TÜRKEZAtatürk University, Faculty of Medicine, Medical Biology DepartmentVerified email at atauni.edu.tr
Saeed ShoaieTranslational Systems Biology, King's College LondonVerified email at kcl.ac.uk
Fredrik PonténProfessor of Pathology, Uppsala UniversityVerified email at igp.uu.se
Linn FagerbergScience for Life LaboratoryVerified email at scilifelab.se
Rui BenfeitasGlobal Clinical Development, Chiesi Farmaceutici S.p.A., Stockholm, SwedenVerified email at chiesi.com
Sunjae LeeSchool of Life Sciences, Gwangju Institute of Science and TechnologyVerified email at gist.ac.kr
Gholamreza BidkhoriResearcher at King's College LondonVerified email at kcl.ac.uk
Cecilia LindskogPhD, Uppsala UniversityVerified email at igp.uu.se
Mehmet Enes ArslanErzurum Technical UniversityVerified email at erzurum.edu.tr
Mehmet ÖzcanZonguldak Bülent Ecevit UniversityVerified email at beun.edu.tr
Özlem Özdemir TozluErzurum Teknik ÜniversitesiVerified email at erzurum.edu.tr
Fredrik EdforsThe Royal Institute of Technology (KTH)Verified email at scilifelab.se
Elias BjörnsonUniversity of Gothenburg, Sahlgrenska Academy, the Wallenberg Laboratory for Cardiovascular andVerified email at wlab.gu.se
Björn M HallströmSNIPR BiomeVerified email at sniprbiome.com
Rasmus AgrenChalmers University of TechnologyVerified email at chalmers.se
Intawat NookaewUniversity of Arkansas for Medical SciencesVerified email at uams.edu

Adil Mardinoglu

Science for Life Laboratory, KTH-Royal Institute of Technology / King's College London

Verified email at scilifelab.se - Homepage

Computational Biology Systems Biology Metabolism Bioinformatics Personalized medicine


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Tissue-based map of the human proteome M Uhlén, L Fagerberg, BM Hallström, C Lindskog, P Oksvold, ... Science 347 (6220), 1260419, 2015	14116	2015
Analysis of the human tissue-specific expression by genome-wide integration of transcriptomics and antibody-based proteomics L Fagerberg, BM Hallström, P Oksvold, C Kampf, D Djureinovic, ... Molecular & cellular proteomics 13 (2), 397-406, 2014	3727	2014
A pathology atlas of the human cancer transcriptome M Uhlen, C Zhang, S Lee, E Sjöstedt, L Fagerberg, G Bidkhori, ... Science 357 (6352), eaan2507, 2017	3117	2017
A subcellular map of the human proteome PJ Thul, L Åkesson, M Wiking, D Mahdessian, A Geladaki, H Ait Blal, ... Science 356 (6340), eaal3321, 2017	2734	2017
A single–cell type transcriptomics map of human tissues M Karlsson, C Zhang, L Méar, W Zhong, A Digre, B Katona, E Sjöstedt, ... Science Advances 7 (31), eabh2169, 2021	1003	2021
An atlas of the protein-coding genes in the human, pig, and mouse brain E Sjöstedt, W Zhong, L Fagerberg, M Karlsson, N Mitsios, C Adori, ... Science 367 (6482), eaay5947, 2020	770	2020
Genome-scale metabolic modelling of hepatocytes reveals serine deficiency in patients with non-alcoholic fatty liver disease A Mardinoglu, R Agren, C Kampf, A Asplund, M Uhlen, J Nielsen Nature communications 5 (1), 3083, 2014	579	2014
Reconstruction of genome-scale active metabolic networks for 69 human cell types and 16 cancer types using INIT R Agren, S Bordel, A Mardinoglu, N Pornputtapong, I Nookaew, J Nielsen PLoS computational biology 8 (5), e1002518, 2012	494	2012
A genome-wide transcriptomic analysis of protein-coding genes in human blood cells M Uhlen, MJ Karlsson, W Zhong, A Tebani, C Pou, J Mikes, ... Science 366 (6472), eaax9198, 2019	459	2019
MEMOTE for standardized genome-scale metabolic model testing C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ... Nature biotechnology 38 (3), 272-276, 2020	432*	2020
An integrated understanding of the rapid metabolic benefits of a carbohydrate-restricted diet on hepatic steatosis in humans A Mardinoglu, H Wu, E Bjornson, C Zhang, A Hakkarainen, SM Räsänen, ... Cell metabolism 27 (3), 559-571. e5, 2018	421	2018
Quantifying diet-induced metabolic changes of the human gut microbiome S Shoaie, P Ghaffari, P Kovatcheva-Datchary, A Mardinoglu, P Sen, ... Cell metabolism 22 (2), 320-331, 2015	405	2015
Identification of anticancer drugs for hepatocellular carcinoma through personalized genome‐scale metabolic modeling R Agren, A Mardinoglu, A Asplund, C Kampf, M Uhlen, J Nielsen Molecular systems biology 10 (3), 721, 2014	386	2014
The human secretome M Uhlén, MJ Karlsson, A Hober, AS Svensson, J Scheffel, D Kotol, ... Science signaling 12 (609), eaaz0274, 2019	365	2019
The gut microbiota modulates host amino acid and glutathione metabolism in mice A Mardinoglu, S Shoaie, M Bergentall, P Ghaffari, C Zhang, E Larsson, ... Molecular systems biology 11 (10), 834, 2015	358	2015
An atlas of human metabolism JL Robinson, P Kocabaş, H Wang, PE Cholley, D Cook, A Nilsson, ... Science signaling 13 (624), eaaz1482, 2020	314	2020
Understanding the interactions between bacteria in the human gut through metabolic modeling S Shoaie, F Karlsson, A Mardinoglu, I Nookaew, S Bordel, J Nielsen Scientific reports 3 (1), 2532, 2013	294	2013
Integration of clinical data with a genome‐scale metabolic model of the human adipocyte A Mardinoglu, R Agren, C Kampf, A Asplund, I Nookaew, P Jacobson, ... Molecular systems biology 9 (1), 649, 2013	259	2013
Integrative personal omics profiles during periods of weight gain and loss BD Piening, W Zhou, K Contrepois, H Röst, GJG Urban, T Mishra, ... Cell systems 6 (2), 157-170. e8, 2018	188	2018
Metabolic network-based stratification of hepatocellular carcinoma reveals three distinct tumor subtypes G Bidkhori, R Benfeitas, M Klevstig, C Zhang, J Nielsen, M Uhlen, J Boren, ... Proceedings of the National Academy of Sciences 115 (50), E11874-E11883, 2018	180	2018

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