| From words to watts: Benchmarking the energy costs of large language model inference S Samsi, D Zhao, J McDonald, B Li, A Michaleas, M Jones, W Bergeron, ... 2023 IEEE High Performance Extreme Computing Conference (HPEC), 1-9, 2023 | 137 | 2023 |
| Great power, great responsibility: Recommendations for reducing energy for training language models J McDonald, B Li, N Frey, D Tiwari, V Gadepally, S Samsi arXiv preprint arXiv:2205.09646, 2022 | 61 | 2022 |
| The mit supercloud dataset S Samsi, ML Weiss, D Bestor, B Li, M Jones, A Reuther, D Edelman, ... 2021 IEEE High Performance Extreme Computing Conference (HPEC), 1-8, 2021 | 24 | 2021 |
| Classifying anomalies for network security EH Do, VN Gadepally ICASSP 2020-2020 IEEE International Conference on Acoustics, Speech and …, 2020 | 23 | 2020 |
| Kawasaki disease, multisystem inflammatory syndrome in children: antibody-induced mast cell activation hypothesis DO Ricke, N Gherlone, P Fremont-Smith, P Tisdall, M Fremont-Smith Journal of Pediatrics and Pediatric Medicine 4 (2), 2020 | 19 | 2020 |
| TranslucentID: analysis of complex DNA SNP mixtures with large numbers of donors DO Ricke, J Watkins, P Fremont-Smith, MS Petrovick, T Boettcher, ... Australian Journal of Forensic Sciences 53 (4), 378-389, 2021 | 8 | 2021 |
| A linear algebra approach to fast DNA mixture analysis using GPUs S Samsi, B Helfer, J Kepner, A Reuther, DO Ricke 2017 IEEE High Performance Extreme Computing Conference (HPEC), 1-6, 2017 | 8 | 2017 |
| Human cytokine and coronavirus nucleocapsid protein interactivity using large-scale virtual screens PJ Tomezsko, CT Ford, AE Meyer, AM Michaleas, R Jaimes III Frontiers in Bioinformatics 4, 1397968, 2024 | 5 | 2024 |
| Axon tracing and centerline detection using topologically-aware 3d u-nets D Pollack, LA Gjesteby, M Snyder, D Chavez, L Kamentsky, K Chung, ... 2022 44th Annual International Conference of the IEEE Engineering in …, 2022 | 5 | 2022 |
| Grigora SNPs: Optimized Analysis of SNPs for DNA Forensics DO Ricke, A Shcherbina, A Michaleas, P Fremont‐Smith Journal of forensic sciences 63 (6), 1841-1845, 2018 | 5 | 2018 |
| GrigoraSNPs: Optimized HTS DNA Forensic SNP Analysis DO Ricke, A Shcherbina, A Michaleas, P Fremont-Smith bioRxiv, 173716, 2017 | 5 | 2017 |
| Hypersparse network flow analysis of packets with graphblas T Trigg, C Meiners, S Pisharody, H Jananthan, M Jones, A Michaleas, ... 2022 IEEE High Performance Extreme Computing Conference (HPEC), 1-7, 2022 | 4 | 2022 |
| Active learning pipeline for brain mapping in a high performance computing environment A Michaleas, LA Gjesteby, M Snyder, D Chavez, M Ash, MA Melton, ... 2020 IEEE High Performance Extreme Computing Conference (HPEC), 1-6, 2020 | 4 | 2020 |
| IdPrism: rapid analysis of forensic DNA samples using MPS SNP profiles DO Ricke, J Watkins, P Fremont-Smith, A Michaleas 2019 IEEE High Performance Extreme Computing Conference (HPEC), 1-5, 2019 | 4 | 2019 |
| Omics analysis and quality control pipelines in a high-performance computing environment DO Ricke, D Ng, A Michaleas, P Fremont-Smith OMICS: A Journal of Integrative Biology 27 (11), 519-525, 2023 | 3 | 2023 |
| Self-supervised learning to improve topology-optimized axon segmentation and centerline detection NI Shamsi, LA Gjesteby, D Chavez, M Snyder, BS Eastwood, MG Fay, ... 2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI), 1-4, 2023 | 3 | 2023 |
| Parallel computing with dna forensics data A Michaleas, P Fremont-Smith, C Lennartz, DO Ricke 2022 IEEE High Performance Extreme Computing Conference (HPEC), 1-7, 2022 | 3 | 2022 |
| The mit supercloud workload classification challenge BJ Tang, Q Chen, ML Weiss, NC Frey, J McDonald, D Bestor, C Yee, ... 2022 IEEE International Parallel and Distributed Processing Symposium …, 2022 | 3 | 2022 |
| Systems and methods for genetic identification and analysis DO Ricke, J Harper, BS Helfer, J Isaacson, AM Michaleas, MS Petrovick, ... US Patent 11,655,498, 2023 | 1 | 2023 |
| Comprehensive guide for epigenetics and transcriptomics data quality control A Comendul, F Ruf-Zamojski, CT Ford, P Agarwal, E Zaslavsky, ... STAR protocols 6 (1), 103607, 2025 | | 2025 |
