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Simone Battaglia
Simone Battaglia
IRCCS San Raffaele Hospital
Verified email at hsr.it
Title
Cited by
Cited by
Year
The 2021 WHO catalogue of Mycobacterium tuberculosis complex mutations associated with drug resistance: a genotypic analysis
TM Walker, P Miotto, CU Köser, PW Fowler, J Knaggs, Z Iqbal, M Hunt, ...
The Lancet Microbe 3 (4), e265-e273, 2022
1382022
Delamanid susceptibility testing of Mycobacterium tuberculosis using the resazurin microtitre assay and the BACTEC™ MGIT™ 960 system
E Schena, L Nedialkova, E Borroni, S Battaglia, AM Cabibbe, S Niemann, ...
Journal of Antimicrobial Chemotherapy 71 (6), 1532-1539, 2016
832016
Application of machine learning techniques to tuberculosis drug resistance analysis
S Kouchaki, Y Yang, TM Walker, A Sarah Walker, DJ Wilson, TEA Peto, ...
Bioinformatics 35 (13), 2276-2282, 2019
782019
Validating a 14-drug microtiter plate containing bedaquiline and delamanid for large-scale research susceptibility testing of Mycobacterium tuberculosis
PMV Rancoita, F Cugnata, AL Gibertoni Cruz, E Borroni, SJ Hoosdally, ...
Antimicrobial agents and chemotherapy 62 (9), e00344-18, 2018
762018
Application of targeted next-generation sequencing assay on a portable sequencing platform for culture-free detection of drug-resistant tuberculosis from clinical samples
AM Cabibbe, A Spitaleri, S Battaglia, RE Colman, A Suresh, S Uplekar, ...
Journal of clinical microbiology 58 (10), e00632-20, 2020
742020
Xpert MTB/XDR: a 10-color reflex assay suitable for point-of-care settings to detect isoniazid, fluoroquinolone, and second-line-injectable-drug resistance directly from …
Y Cao, H Parmar, RL Gaur, D Lieu, S Raghunath, N Via, S Battaglia, ...
Journal of clinical microbiology 59 (3), e02314-20, 2021
712021
Comparison of core-genome MLST, coreSNP and PFGE methods for Klebsiella pneumoniae cluster analysis
F Gona, F Comandatore, S Battaglia, A Piazza, A Trovato, G Lorenzin, ...
Microbial genomics 6 (4), 2020
572020
Characterization of genomic variants associated with resistance to bedaquiline and delamanid in naive Mycobacterium tuberculosis clinical strains
S Battaglia, A Spitaleri, AM Cabibbe, CJ Meehan, C Utpatel, N Ismail, ...
Journal of clinical microbiology 58 (11), e01304-20, 2020
542020
DeepAMR for predicting co-occurrent resistance of Mycobacterium tuberculosis
Y Yang, TM Walker, AS Walker, DJ Wilson, TEA Peto, DW Crook, ...
Bioinformatics 35 (18), 3240-3249, 2019
432019
Whole genome sequencing results associated with minimum inhibitory concentrations of 14 anti-tuberculosis drugs among rifampicin-resistant isolates of Mycobacterium …
J Kardan-Yamchi, H Kazemian, S Battaglia, H Abtahi, ...
Journal of Clinical Medicine 9 (2), 465, 2020
222020
Detection of NDM-1/5 and OXA-48 co-producing XDR hyper-virulent Klebsiella pneumoniae in Northern Italy
G Lorenzin, F Gona, S Battaglia, A Spitaleri, F Saluzzo, A Trovato, ...
Journal of Global Antimicrobial Resistance, 2022
19*2022
Bedaquiline and clofazimine resistance in Mycobacterium tuberculosis: an in-vitro and in-silico data analysis
L Sonnenkalb, JJ Carter, A Spitaleri, Z Iqbal, M Hunt, KM Malone, ...
The Lancet Microbe 4 (5), e358-e368, 2023
142023
An innovative silicon-chip for sensitive real time PCR improvement in pathogen detection
S Battaglia, S Petralia, N Vicario, D Cirillo, S Conoci
Analyst 144 (7), 2353-2358, 2019
132019
A data compendium of Mycobacterium tuberculosis antibiotic resistance
A Brankin, KM Malone, I Barilar, S Battaglia, E Borroni, AP Brandao, ...
bioRxiv, 2021.09. 14.460274, 2021
72021
Implementation of a Consensus Set of Hypervariable Mycobacterial Interspersed Repetitive-Unit–Variable-Number Tandem-Repeat Loci in Mycobacterium tuberculosis Molecular …
A Trovato, S Tafaj, S Battaglia, R Alagna, D Bardhi, P Kapisyzi, S Bala, ...
Journal of clinical microbiology 54 (2), 478-482, 2016
72016
Advantages of long-and short-reads sequencing for the hybrid investigation of the Mycobacterium tuberculosis genome
F Di Marco, A Spitaleri, S Battaglia, V Batignani, AM Cabibbe, DM Cirillo
Frontiers in Microbiology 14, 1104456, 2023
62023
Lack of association of novel mutation Asp397Gly in aftB gene with ethambutol resistance in clinical isolates of Mycobacterium tuberculosis
A Giri, H Safi, AM Cabibbe, S Gupta, A Narang, G Tyagi, K Shrivastava, ...
Tuberculosis 115, 49-55, 2019
32019
Comprehensive Drug Resistance Characterization of Pulmonary Tuberculosis in Algeria: Insights on Mycobacterium tuberculosis Strains by Whole-Genome …
D Benremila, F Djoudi, A Gharout-Sait, S Kheloufi, A Spitaleri, S Battaglia, ...
Microbial Drug Resistance, 2023
2023
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