| Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment KR Chng, C Li, D Bertrand, AHQ Ng, JS Kwah, HM Low, C Tong, ... Nature medicine 26 (6), 941-951, 2020 | 163 | 2020 |
| An expectation-maximization algorithm enables accurate ecological modeling using longitudinal microbiome sequencing data C Li, KR Chng, JS Kwah, TV Av-Shalom, L Tucker-Kellogg, N Nagarajan Microbiome 7, 1-14, 2019 | 30 | 2019 |
| Consortium MSUB, Chen SL, Mason CE, Ng OT, Marimuthu K, Ang B, Nagarajan N (2020). Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital … KR Chng, C Li, D Bertrand, AHQ Ng, JS Kwah, HM Low, C Tong, ... Nature Medicine 26 (6), 941-951, 0 | 4 | |
| OnTarget: in silico design of MiniPromoters for targeted delivery of expression O Fornes, TV Av-Shalom, AJ Korecki, RA Farkas, DJ Arenillas, ... Nucleic Acids Research 51 (W1), W379-W386, 2023 | 3 | 2023 |
| Towards integrative plant pathology T Ruiz-Bedoya, KJ McTavish, TV Av-Shalom, D Desveaux, DS Guttman Current Opinion in Plant Biology 75, 102430, 2023 | 2 | 2023 |
| BEEM-Static: Accurate inference of ecological interactions from cross-sectional microbiome data C Li, TV Av-Shalom, JWG Tan, JS Kwah, KR Chng, N Nagarajan PLoS Computational Biology 17 (9), e1009343, 2021 | 2 | 2021 |
| GeneBreaker: Variant simulation to improve the diagnosis of Mendelian rare genetic diseases PA Richmond, TV Av‐Shalom, O Fornes, B Modi, AM Elliott, ... Human Mutation 42 (4), 346-358, 2021 | 2 | 2021 |
| Demonstrating the utility of flexible sequence queries against indexed short reads with FlexTyper PA Richmond, AM Kaye, GJ Kounkou, TV Av-Shalom, WW Wasserman PLoS Computational Biology 17 (3), e1008815, 2021 | 2 | 2021 |
| Knowledge Base of Inborn Errors of Metabolism (IEMbase): A Practical Approach TV Av-Shalom, JJY Lee, CR Ferreira, N Blau, CDM van Karnebeek, ... Physician's Guide to the Diagnosis, Treatment, and Follow-Up of Inherited …, 2022 | 1 | 2022 |
| BEEM-Static: Accurate inference of ecological interactions from cross-sectional metagenomic data C Li, TV Av-Shalom, JW Gerald Tan, J Samantha Kwah, KR Chng, ... bioRxiv, 2020.11. 23.394999, 2020 | 1 | 2020 |
