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Alicia K. Byrd
Alicia K. Byrd
Verified email at uams.edu
Title
Cited by
Cited by
Year
Protein displacement by an assembly of helicase molecules aligned along single-stranded DNA
AK Byrd, KD Raney
Nature structural & molecular biology 11 (6), 531-538, 2004
1662004
Superfamily 2 helicases
AK Byrd, KD Raney
Frontiers in bioscience (Landmark edition) 17, 2070, 2012
1582012
Pre-steady-state DNA unwinding by bacteriophage T4 Dda helicase reveals a monomeric molecular motor
B Nanduri, AK Byrd, RL Eoff, AJ Tackett, KD Raney
Proceedings of the National Academy of Sciences 99 (23), 14722-14727, 2002
1062002
proteiNorm–A user-friendly tool for normalization and analysis of TMT and label-free protein quantification
S Graw, J Tang, MK Zafar, AK Byrd, C Bolden, EC Peterson, SD Byrum
ACS omega 5 (40), 25625-25633, 2020
922020
A CRISPR-based approach for proteomic analysis of a single genomic locus
ZJ Waldrip, SD Byrum, AJ Storey, J Gao, AK Byrd, SG Mackintosh, ...
Epigenetics 9 (9), 1207-1211, 2014
912014
Evidence that G-quadruplex DNA accumulates in the cytoplasm and participates in stress granule assembly in response to oxidative stress
AK Byrd, BL Zybailov, L Maddukuri, J Gao, JC Marecki, M Jaiswal, ...
Journal of Biological Chemistry 291 (34), 18041-18057, 2016
902016
Hepatitis C Virus NS3 and Simian Virus 40 T Antigen Helicases Displace Streptavidin from 5 ‘-Biotinylated Oligonucleotides but Not from 3 ‘-Biotinylated Oligonucleotides …
PD Morris, AK Byrd, AJ Tackett, CE Cameron, P Tanega, R Ott, E Fanning, ...
Biochemistry 41 (7), 2372-2378, 2002
902002
Structure and mechanisms of SF1 DNA helicases
KD Raney, AK Byrd, S Aarattuthodiyil
DNA helicases and DNA motor proteins, 17-46, 2013
882013
Increasing the length of the single-stranded overhang enhances unwinding of duplex DNA by bacteriophage T4 Dda helicase
AK Byrd, KD Raney
Biochemistry 44 (39), 12990-12997, 2005
732005
Structure and function of Pif1 helicase
AK Byrd, KD Raney
Biochemical Society Transactions 45 (5), 1159-1171, 2017
702017
A parallel quadruplex DNA is bound tightly but unfolded slowly by pif1 helicase
AK Byrd, KD Raney
Journal of Biological Chemistry 290 (10), 6482-6494, 2015
702015
A serotonin-induced N-glycan switch regulates platelet aggregation
CP Mercado, MV Quintero, Y Li, P Singh, AK Byrd, K Talabnin, M Ishihara, ...
Scientific reports 3 (1), 2795, 2013
702013
Displacement of a DNA binding protein by Dda helicase
AK Byrd, KD Raney
Nucleic acids research 34 (10), 3020-3029, 2006
642006
Yeast Pif1 helicase exhibits a one-base-pair stepping mechanism for unwinding duplex DNA
R Ramanagoudr-Bhojappa, S Chib, AK Byrd, S Aarattuthodiyil, M Pandey, ...
Journal of Biological Chemistry 288 (22), 16185-16195, 2013
592013
G-Quadruplex loops regulate PARP-1 enzymatic activation
AD Edwards, JC Marecki, AK Byrd, J Gao, KD Raney
Nucleic Acids Research 49 (1), 416-431, 2021
522021
Yeast helicase Pif1 unwinds RNA: DNA hybrids with higher processivity than DNA: DNA duplexes
S Chib, AK Byrd, KD Raney
Journal of Biological Chemistry 291 (11), 5889-5901, 2016
522016
Dda helicase tightly couples translocation on single-stranded DNA to unwinding of duplex DNA: Dda is an optimally active helicase
AK Byrd, DL Matlock, D Bagchi, S Aarattuthodiyil, D Harrison, V Croquette, ...
Journal of molecular biology 420 (3), 141-154, 2012
502012
Yeast transcription co-activator Sub1 and its human homolog PC4 preferentially bind to G-quadruplex DNA
J Gao, BL Zybailov, AK Byrd, WC Griffin, S Chib, SG Mackintosh, ...
Chemical communications 51 (33), 7242-7244, 2015
492015
The T4 phage SF1B helicase Dda is structurally optimized to perform DNA strand separation
X He, AK Byrd, MK Yun, CW Pemble, D Harrison, L Yeruva, C Dahl, ...
Structure 20 (7), 1189-1200, 2012
492012
Mitochondrial genetic variation is enriched in G-quadruplex regions that stall DNA synthesis in vitro
TJ Butler, KN Estep, JA Sommers, RW Maul, AZ Moore, S Bandinelli, ...
Human molecular genetics 29 (8), 1292-1309, 2020
482020
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