Protein displacement by an assembly of helicase molecules aligned along single-stranded DNA AK Byrd, KD Raney Nature structural & molecular biology 11 (6), 531-538, 2004 | 166 | 2004 |
Superfamily 2 helicases AK Byrd, KD Raney Frontiers in bioscience (Landmark edition) 17, 2070, 2012 | 158 | 2012 |
Pre-steady-state DNA unwinding by bacteriophage T4 Dda helicase reveals a monomeric molecular motor B Nanduri, AK Byrd, RL Eoff, AJ Tackett, KD Raney Proceedings of the National Academy of Sciences 99 (23), 14722-14727, 2002 | 106 | 2002 |
proteiNorm–A user-friendly tool for normalization and analysis of TMT and label-free protein quantification S Graw, J Tang, MK Zafar, AK Byrd, C Bolden, EC Peterson, SD Byrum ACS omega 5 (40), 25625-25633, 2020 | 92 | 2020 |
A CRISPR-based approach for proteomic analysis of a single genomic locus ZJ Waldrip, SD Byrum, AJ Storey, J Gao, AK Byrd, SG Mackintosh, ... Epigenetics 9 (9), 1207-1211, 2014 | 91 | 2014 |
Evidence that G-quadruplex DNA accumulates in the cytoplasm and participates in stress granule assembly in response to oxidative stress AK Byrd, BL Zybailov, L Maddukuri, J Gao, JC Marecki, M Jaiswal, ... Journal of Biological Chemistry 291 (34), 18041-18057, 2016 | 90 | 2016 |
Hepatitis C Virus NS3 and Simian Virus 40 T Antigen Helicases Displace Streptavidin from 5 ‘-Biotinylated Oligonucleotides but Not from 3 ‘-Biotinylated Oligonucleotides … PD Morris, AK Byrd, AJ Tackett, CE Cameron, P Tanega, R Ott, E Fanning, ... Biochemistry 41 (7), 2372-2378, 2002 | 90 | 2002 |
Structure and mechanisms of SF1 DNA helicases KD Raney, AK Byrd, S Aarattuthodiyil DNA helicases and DNA motor proteins, 17-46, 2013 | 88 | 2013 |
Increasing the length of the single-stranded overhang enhances unwinding of duplex DNA by bacteriophage T4 Dda helicase AK Byrd, KD Raney Biochemistry 44 (39), 12990-12997, 2005 | 73 | 2005 |
Structure and function of Pif1 helicase AK Byrd, KD Raney Biochemical Society Transactions 45 (5), 1159-1171, 2017 | 70 | 2017 |
A parallel quadruplex DNA is bound tightly but unfolded slowly by pif1 helicase AK Byrd, KD Raney Journal of Biological Chemistry 290 (10), 6482-6494, 2015 | 70 | 2015 |
A serotonin-induced N-glycan switch regulates platelet aggregation CP Mercado, MV Quintero, Y Li, P Singh, AK Byrd, K Talabnin, M Ishihara, ... Scientific reports 3 (1), 2795, 2013 | 70 | 2013 |
Displacement of a DNA binding protein by Dda helicase AK Byrd, KD Raney Nucleic acids research 34 (10), 3020-3029, 2006 | 64 | 2006 |
Yeast Pif1 helicase exhibits a one-base-pair stepping mechanism for unwinding duplex DNA R Ramanagoudr-Bhojappa, S Chib, AK Byrd, S Aarattuthodiyil, M Pandey, ... Journal of Biological Chemistry 288 (22), 16185-16195, 2013 | 59 | 2013 |
G-Quadruplex loops regulate PARP-1 enzymatic activation AD Edwards, JC Marecki, AK Byrd, J Gao, KD Raney Nucleic Acids Research 49 (1), 416-431, 2021 | 52 | 2021 |
Yeast helicase Pif1 unwinds RNA: DNA hybrids with higher processivity than DNA: DNA duplexes S Chib, AK Byrd, KD Raney Journal of Biological Chemistry 291 (11), 5889-5901, 2016 | 52 | 2016 |
Dda helicase tightly couples translocation on single-stranded DNA to unwinding of duplex DNA: Dda is an optimally active helicase AK Byrd, DL Matlock, D Bagchi, S Aarattuthodiyil, D Harrison, V Croquette, ... Journal of molecular biology 420 (3), 141-154, 2012 | 50 | 2012 |
Yeast transcription co-activator Sub1 and its human homolog PC4 preferentially bind to G-quadruplex DNA J Gao, BL Zybailov, AK Byrd, WC Griffin, S Chib, SG Mackintosh, ... Chemical communications 51 (33), 7242-7244, 2015 | 49 | 2015 |
The T4 phage SF1B helicase Dda is structurally optimized to perform DNA strand separation X He, AK Byrd, MK Yun, CW Pemble, D Harrison, L Yeruva, C Dahl, ... Structure 20 (7), 1189-1200, 2012 | 49 | 2012 |
Mitochondrial genetic variation is enriched in G-quadruplex regions that stall DNA synthesis in vitro TJ Butler, KN Estep, JA Sommers, RW Maul, AZ Moore, S Bandinelli, ... Human molecular genetics 29 (8), 1292-1309, 2020 | 48 | 2020 |