Dynamics of strand slippage in DNA hairpins formed by CAG repeats: roles of sequence parity and trinucleotide interrupts P Xu, F Pan, C Roland, C Sagui, K Weninger Nucleic acids research 48 (5), 2232-2245, 2020 | 44 | 2020 |
A blind benchmark of analysis tools to infer kinetic rate constants from single-molecule FRET trajectories M Götz, A Barth, SSR Bohr, R Börner, J Chen, T Cordes, DA Erie, ... Nature communications 13 (1), 5402, 2022 | 29 | 2022 |
Molecular conformations and dynamics of nucleotide repeats associated with neurodegenerative diseases: double helices and CAG hairpin loops F Pan, Y Zhang, P Xu, VH Man, C Roland, K Weninger, C Sagui Computational and Structural Biotechnology Journal 19, 2819-2832, 2021 | 13 | 2021 |
Structure, dynamics, and regulation of TRF1-TIN2-mediated trans-and cis-interactions on telomeric DNA H Pan, P Kaur, R Barnes, AC Detwiler, SL Sanford, M Liu, P Xu, C Mahn, ... Journal of Biological Chemistry 297 (3), 2021 | 10 | 2021 |
Frustration between preferred states of complementary trinucleotide repeat DNA hairpins anticorrelates with expansion disease propensity P Xu, J Zhang, F Pan, C Mahn, C Roland, C Sagui, K Weninger Journal of Molecular Biology 435 (10), 168086, 2023 | 3 | 2023 |
Inferring kinetic rate constants from single-molecule FRET trajectories–a blind benchmark of kinetic analysis tools M Götz, A Barth, SSR Bohr, R Börner, J Chen, T Cordes, DA Erie, ... bioRxiv, 2021.11. 23.469671, 2021 | 3 | 2021 |
Reply to: On the statistical foundation of a recent single molecule FRET benchmark M Götz, A Barth, SSR Bohr, R Börner, J Chen, T Cordes, DA Erie, ... Nature communications 15 (1), 3626, 2024 | | 2024 |
Interaction between DNA mismatch repair proteins and triplet repeat DNA observed from single-molecule FRET measurements P Xu, K Weninger Biophysical Journal 121 (3), 209a, 2022 | | 2022 |
Dynamic Slippage of Mutagenic Trinucleotide Repeat DNA Revealed by Single Molecule Fret P Xu North Carolina State University, 2022 | | 2022 |
TIN2 facilitates TRF1-mediated trans-and cis-interactions on physiologically relevant long telomeric DNA H Pan, P Kaur, R Barnes, Q Tang, KR Weninger, R Riehn, S Smith, ... Biophysical Journal 120 (3), 138a, 2021 | | 2021 |
Toward Single Molecule FRET Studies of DNA Mismatch Repair in Live Bacteria P Xu, A Hensley, E Chan, KR Weninger Biophysical Journal 116 (3), 139a, 2019 | | 2019 |
Single Molecule FRET Observations of Folding for DNA Hairpins Containing Trinucleotide Repeats P Xu, K Weninger Biophysical Journal 114 (3), 599a, 2018 | | 2018 |